Job Description P32140 Confidence 98.64% Date Thu Jan 5 11:49:26 GMT 2012 Rank 9 Aligned Residues 304 % Identity 16% Template c3gzkA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cellulase; PDBTitle: structure of a. acidocaldarius cellulase cela Resolution 1.80 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.																			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Query Sequence		E	M	G	T	H	L	W	I	T	A	R	M	L	H	V	Y	S	V	A	A	A	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	P	G	A	Y	S	L	V	D	H	G	I	K	A	M	N	G	A	L	R	D	K	K	Y	G	G	W	Y	A	C	V	N	D	.	.	.	.	.	.
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																.	.	.	.	.	.
Template Conservation																																																												.
Template Sequence		D	Y	G	K	Y	T	V	P	A	A	K	A	V	A	D	L	L	L	A	H	E	Y	F	P	A	A	L	A	H	V	R	P	M	R	S	V	H	R	A	P	H	L	P	P	A	L	E	V	A	R	E	E	I	A	W	L	L	T	.	M	Q	D	P	A	T	G	G	V	Y	H	K	V	T	T	P	S	F	P	P	L
Template Known Secondary structure		S																												T				S	G	G	G	S		S	S																			.	T	B		T	T	T			B	B	S					S	S				T
Template Predicted Secondary structure																																																												.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
			101	.	.	.	.	.	.	.	.	110	.								.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure		.												.	.	.	.	.	.	.
Query SS confidence		.												.	.	.	.	.	.	.
Query Sequence		.	E	G	V	V	D	A	S	K	Q	G	Y	.	.	.	.	.	.	.	Q	H	F	F	A	L	L	G	A	A	S	A	V	T	T	G	H	P	E	A	R	K	L	L	D	Y	T	I	E	I	I	E	K	Y	F	W	S	E	E	E	Q	M	C	L	E	S	W	D	E	A	F	S	K	T	E	E	Y	R	G	G	N
Query Conservation		.												.	.	.	.	.	.	.
Alig confidence		.												.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	R	P	E	D	D	D	A	P	L	V	L	S	P	I	S	Y	A	A	T	A	T	F	C	A	A	M	A	H	A	A	L	V	Y	R	P	F	D	P	A	L	S	S	C	C	A	D	A	A	R	R	A	Y	A	W	L	G	A	H	E	M	Q	P	F	H	N	P	D	G	I	L	T	G	E	Y	G	D	A	E
Template Known Secondary structure		T			G	G	G			S							B																				T	T	T																					T	S									T	T			S						S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	M	H	A	V	E	A	F	L	I	V	Y	D	V	T	H	D	K	K	W	L	D	R	A	I	R	V	A	S	V	I	I	H	D	V	A	R	N	N	H	Y	R	V	N	E	H	F	D	T	Q	W	N	P	L	P	D	Y	N	K	D	N	P	A	H	R	F	R	A	F	G	G	T	P	G	H	W	I	E	W
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	D	E	L	L	W	A	S	C	A	L	L	R	M	T	G	D	S	A	W	A	R	V	C	E	P	L	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	L	P	W	E	L	G	W	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	A	L	Y	G	V	M
Template Known Secondary structure																				G	G	G										.	.	.	.	.	.	.	.	.	.	.	.	.	S							S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.														.	.	.	.	.	340	.	.	.	.																				.	.	.	.	.	350	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.						.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.
Query Sequence		G	R	L	M	L	H	I	H	A	A	L	E	A	R	C	E	Q	P	P	A	W	L	L	E	D	A	K	G	L	F	N	A	T	V	R	D	A	W	A	P	D	G	A	D	G	I	V	Y	T	V	D	W	E	G	K	P	V	V	R	E	R	V	R	W	.	.	.	.	.	P	I	V	E	A	M	G	T	A	Y	A
Query Conservation																																																																		.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Y	L	R	T	P	R	A	A	V	S	D	D	V	R	N	K	V	K	S	R	L	L	R	E	L	D	A	L	A	A	M	A	E	S	H	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	P	M	R	D	D	D	F	I	W	G	S	N	M	V	L	L	N	R	A	M	A	F	L	L	A
Template Known Secondary structure					T	S		G	G	G	S																										S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S			G	G	G			T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390																.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380			.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		L	Y	T	V	T	G	D	R	Q	Y	E	T	W	Y	Q	T	W	W	E	Y	C	I	K	Y	L	M	D	Y	E	N	G	S	W	W	Q	E	L	D	A	D	N	K	V	T	T	K	V	W	D	G	K	Q	D	.	.	I	Y	H	L	L	H	C	L	V	I	P	R	I	P	L	A	P	G	M	A	P	A	V	A	A
Query Conservation																																																							.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	V	G	V	L	H	P	A	A	H	T	V	A	Q	R	A	A	D	Y	L	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	P	L	G	Q	C	Y	V	T	G	F	G	Q	R	P	V	R	H	P	H	H	R	P	S	V	A	D	D	V	D	H	P	V	P	G	M	V	V	G	G	P	N	R
Template Known Secondary structure		G	G	G	T				T	T													B	T	.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T			B		B	B	T		S	S	S		B		S		B									T	T	S			T	T		B						T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440														.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
		406	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	Q	D
Template Known Secondary structure		T			S
Template Predicted Secondary structure
Template SS confidence
		485	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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