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Job DescriptionP32140
Confidence100.00%DateThu Jan 5 11:49:26 GMT 2012
Rank2Aligned Residues384
% Identity28%Templatec3gt5A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:n-acetylglucosamine 2-epimerase; PDBTitle: crystal structure of an n-acetylglucosamine 2-epimerase family protein2 from xylella fastidiosa
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60..... ....70.........80..
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Query Sequence  FNTLSHNRWLEQETDRIFDFGKNSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAAA. MGRPGAYSLVDHGIKAM
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Template Sequence  FRSADFLRTHISDTMAFYHPRCIDSAGGFFHYFRDDGSIYNATHRHLVSSTRFVFNYAMAYLQFGTAEYLDAVHHGLSYV
Template Known Secondary structure  TTSTTTTB
TTSSB


TTS
SS

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   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  NGALRDKKYGGWYACVNDEGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDEAF
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Template Sequence  RDVHRNPATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSCGLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQW
Template Known Secondary structure  TTB
TTTS
B
STT

TT
TTTTTTT


TT
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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  SKTEEYRGGNANMHAVEAFLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFRAF
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Template Sequence  N. FTRYRGQNANMHMCEAMLAAYEASGEQRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPW
Template Known Secondary structure 
.B
S


TTTTTS

S
TTS
B
TTTTTTSTT
SSS
S
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   172 .......180.........190.........200.........210.........220.........230.........240.........250
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
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Query Sequence  GGTPGHWIEWGRLMLHIHAALEARCEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVYTVDWEGKPVVRERVRWPIVEAM
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Template Sequence  GFQPGHQTEWAKLLLILDRYIEV. . . . . . EWLVPVARSLFDVAVARSWDAV. RGGLCYGFAPDGTICDDDKYFWVQAESL
Template Known Secondary structure  SB



......TTB
TT.T
SB
S
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   251........260.........270... ......280.........290..... ....300.........310.........320...
 
   323......330.........340.........350.........360.........370..... ....380.........390......
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Query Sequence  GTAYALYTVTGDRQYETWYQTWWEYCIKYLMDYENGSWWQELDADNKVTTKVW. . DGKQDIYHLLHCLVIPRIPLA
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Template Sequence  AAAALLATRSGDERYWQWYDRLWAYAWQHMVDHRYGAWYRLLDGDNRKYNDEKSPAGKT. DYHTMGACHEVLNVVW
Template Known Secondary structure 

TB
TTT
SB
S
TTS
B

S

B
TT
S.STTS
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   324.....330.........340.........350.........360.........370.........380.. .......390........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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