Job Description P32140 Confidence 82.72% Date Thu Jan 5 11:49:26 GMT 2012 Rank 57 Aligned Residues 175 % Identity 10% Template c3eu8D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:putative glucoamylase; PDBTitle: crystal structure of putative glucoamylase (yp_210071.1) from2 bacteroides fragilis nctc 9343 at 2.12 a resolution Resolution 2.12 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure															.												.	.																													.	.								.	.	.
Query SS confidence															.												.	.																													.	.								.	.	.
Query Sequence		N	R	W	L	E	Q	E	T	D	R	I	F	D	.	F	G	K	N	S	V	V	P	T	G	F	.	.	G	W	L	G	N	K	G	Q	I	K	E	E	M	G	T	H	L	W	I	T	A	R	M	L	H	V	Y	S	.	.	V	A	A	A	M	G	R	.	.	.	P	G	A	Y	S	L	V	D	H	G	I	K	A
Query Conservation															.												.	.																													.	.								.	.	.
Alig confidence															.												.	.																													.	.								.	.	.
Template Conservation
Template Sequence		D	A	L	X	D	T	V	Q	R	R	T	F	N	Y	F	W	D	A	A	E	P	N	S	G	L	A	R	E	R	Y	H	X	D	G	E	Y	P	A	G	G	P	E	I	V	T	S	G	G	S	G	F	G	I	X	A	I	L	A	G	I	D	R	G	Y	V	S	R	E	E	G	L	R	R	X	E	K	I	V	G	F
Template Known Secondary structure																			S	S		T	T	T				B	S				T	T				T	T	S		T	T																				T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.							130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.
Predicted Secondary structure																							.							.	.	.	.	.																						.	.	.	.	.	.															.
Query SS confidence																							.							.	.	.	.	.																						.	.	.	.	.	.															.
Query Sequence		M	N	G	A	L	R	D	K	K	Y	G	G	W	Y	A	C	V	N	D	E	G	.	V	V	D	A	S	K	.	.	.	.	.	Q	G	Y	Q	H	F	F	A	L	L	G	A	A	S	A	V	T	T	G	H	P	.	.	.	.	.	.	E	A	R	K	L	L	D	Y	T	I	E	I	I	E	.	K	Y	F	W	S
Query Conservation																							.							.	.	.	.	.																						.	.	.	.	.	.															.
Alig confidence					.																		.							.	.	.	.	.																						.	.	.	.	.	.															.
Template Conservation					.
Template Sequence		L	E	K	.	A	D	R	F	K	G	A	Y	P	H	W	W	N	G	E	T	G	H	V	Q	P	F	G	Q	K	D	N	G	G	D	L	V	E	T	A	F	L	X	Q	G	L	L	A	V	H	Q	Y	Y	A	E	G	S	A	E	E	K	K	L	A	G	R	I	D	K	L	W	R	E	V	D	W	N	W	Y	R	H
Template Known Secondary structure					.	S			B	T	T	B			S				T	T	T			B			B	T	T	T	B		S																					T	T	S																				G	G	G	G	G	T
Template Predicted Secondary structure					.
Template SS confidence
		120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	E	Q	M	C	L	E	S	W	D	E	A	F	S	K	T	E	E	Y	R	G	G	N	A	N	M	H	A	V	E	A	F	L	I	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	Q	N	V	L	Y	W	H	W	S	P	E	Y	G	W	E	X	N	F	P	V	H	G	Y	N	E	C	L	I	X	Y	I	L	A	A	A
Template Known Secondary structure		T	T		S	S		B	S			B	T	T	T	B	T	T	T			B			S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions