Job Description P32140 Confidence 97.43% Date Thu Jan 5 11:49:26 GMT 2012 Rank 26 Aligned Residues 133 % Identity 17% Template c3e6uA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:lanc-like protein 1; PDBTitle: crystal structure of human lancl1 Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		56	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.
Predicted Secondary structure												.																																																														.
Query SS confidence												.																																																														.
Query Sequence		M	L	H	V	Y	S	V	A	A	A	.	M	G	R	P	G	A	Y	S	L	V	D	H	G	I	K	A	M	N	G	A	L	R	D	K	K	Y	G	G	W	Y	A	C	V	N	D	E	G	V	V	D	A	S	K	Q	G	Y	Q	H	F	F	A	L	L	G	A	A	S	A	V	T	T	.	G	H	P	E	A	R	K
Query Conservation												.																																																														.
Alig confidence												.																				.								.	.																																	.
Template Conservation																																.								.	.
Template Sequence		I	Y	Y	Y	L	M	Q	P	S	L	Q	V	S	Q	G	K	L	H	S	L	V	K	P	S	V	D	Y	V	C	Q	.	L	K	F	P	S	G	N	.	.	Y	P	P	C	I	G	D	N	R	D	L	L	V	H	W	C	H	G	A	P	G	V	I	Y	M	L	I	Q	A	Y	K	V	F	R	E	E	K	Y	L	C
Template Known Secondary structure							T		G	G	G										T											.	T			T	T	S		.	.			S	B	T	T								S	S	S	S	S
Template Predicted Secondary structure																																.								.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		L	L	D	Y	T	I	E	I	I	E	K	Y	F	W	S	E	E	.	E	Q	M	C	L	E	S	W	D	E	A	F	S	K	T	E	E	Y	R	G	G	N	A	N	M	H	A	V	E	A	F	L	I	V	Y	D	V	T	H	D	K	K	W	L	D	R	A	I	R	V	A	S	V	I	I	H	D	V
Query Conservation																			.
Alig confidence																			.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	Y	Q	C	A	D	V	I	W	Q	Y	G	L	L	K	K	G	Y	G	L	C	H	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	N	A	Y	A	F	L	T	L	Y	N	L	T	Q	D	M	K	Y	L	Y	R	A	C	K	F	A	E	W	C	L	E	Y	G
Template Known Secondary structure															S	B	T	T		S		S	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															T	T	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.																		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions