Job Description P32140 Confidence 65.19% Date Thu Jan 5 11:49:26 GMT 2012 Rank 64 Aligned Residues 238 % Identity 11% Template c3cu7A_ PDB info PDB header:immune system Chain: A: PDB Molecule:complement c5; PDBTitle: human complement component 5 Resolution 3.10 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	N	R	W	L	E	Q	E	T	D	R	I	F	D	F	G	K	N	S	V	V	P	T	G	F	G	W	L	G	N	K	G	Q	I	K	E	E	M	G	T	H	L	W	I	T	A	R	M	L	H	V	Y	S	V	A	A	A	M	G	R	P	G	A	Y	S	L	V	D	H	G	I	K	A	M	N	G	A	L	R
Query Conservation
Alig confidence																						.	.	.								.	.	.	.	.	.	.																									.
Template Conservation																						.	.	.								.	.	.	.	.	.	.																									.
Template Sequence		K	L	K	K	K	L	K	E	G	M	L	S	I	M	S	Y	R	N	A	D	.	.	.	Y	S	Y	S	V	W	K	.	.	.	.	.	.	.	G	G	S	A	S	T	W	L	T	A	F	A	L	R	V	L	G	Q	V	N	K	Y	V	E	.	Q	N	Q	N	S	I	C	N	S	L	L	W	L	V	E	N	Y	Q
Template Known Secondary structure														G	G	G	G	B		T	T	.	.	.	S		B		S	S	S	.	.	.	.	.	.	.	S	S																			T	T	S		.																	S	B
Template Predicted Secondary structure																						.	.	.								.	.	.	.	.	.	.																									.
Template SS confidence
		1044	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.				.	.	.	.	.	.	1070								.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.		.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.								.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.														.
Query SS confidence																												.	.	.	.	.	.	.														.
Query Sequence		D	K	K	Y	G	G	W	Y	A	C	V	N	D	E	G	V	V	D	A	S	K	Q	G	Y	Q	H	.	.	.	.	.	.	.	F	F	A	L	L	G	A	A	S	A	V	T	T	.	G	H	P	E	A	R	K	L	L	D	Y	T	I	E	I	I	E	K	Y	F	W	S	E	E	E	Q	M	C	L	E	S	W	D
Query Conservation																												.	.	.	.	.	.	.														.
Alig confidence																												.	.	.	.	.	.	.														.																										.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		L	D	N	G	S	F	K	E	N	S	Q	Y	Q	P	I	K	L	Q	G	T	L	P	V	E	A	R	E	N	S	L	Y	L	T	A	F	T	V	I	G	I	R	K	A	F	D	I	C	P	L	V	K	I	D	T	A	L	I	K	A	D	N	F	L	L	E	N	T	L	P	A	Q	S	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	S		B				S	S								S																								T	G	G	G	S																					S	S		S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		1113	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	F	S	K	T	E	E	Y	R	G	G	N	A	N	M	H	A	V	E	A	F	L	I	V	Y	D	V	T	H	D	K	K	W	L	D	R	A	I	R	V	A	S	V	I	I	H	D	V	A	R	N	N	H	Y	R	V	N	E	H	F	D	T	Q	W	N	P	L	P	D	Y	N	K	D	N	P	A	H	R	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	T	L	A	I	S	A	Y	A	L	S	L	G	D	K	T	H	P	Q	F	R	S	I	V	S	A	L	K	R	E	A	L	V	K	G	N	P	P	I	Y	R	F	W	K	D	N	L	Q	H	K	D	S	S	V	P	N	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	S		T	T																			T	T	T	T	S						S		S	S			S	S				S	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.
Template SS confidence
																			1185	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	F	G	G	T	P	G	H	W	I	E	W	G	R	L	M	L	H	I	H	A	A	L	E	A	R	C	E	Q	P	P	A	W	L	L	E	D	A	K	G	L	F	N	A	T	V	R	D	A	W	A	P	D	G	A	D	G	I	V	Y	T	V	D
Query Conservation
Alig confidence		.	.	.	.																							.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation		.	.	.	.																							.	.	.	.	.	.	.	.	.															.	.	.
Template Sequence		.	.	.	.	T	G	T	A	R	M	V	E	T	T	A	Y	A	L	L	T	S	L	N	L	K	D	.	.	.	.	.	.	.	.	.	I	N	Y	V	N	P	V	I	K	W	L	S	E	E	.	.	.	Q	R	Y	G	G	G	F	Y	S	T	Q	D
Template Known Secondary structure		.	.	.	.																				T	T		.	.	.	.	.	.	.	.	.															.	.	.	S		S	S	S			S	T	T	T	T
Template Predicted Secondary structure		.	.	.	.																							.	.	.	.	.	.	.	.	.															.	.	.
Template SS confidence
						1242	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.										.	.	.	.	.	.	1270	.	.	.	.	.	.	.				.	.	1280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions