Job Description P32140 Confidence 6.72% Date Thu Jan 5 11:49:26 GMT 2012 Rank 81 Aligned Residues 147 % Identity 11% Template c3a0oB_ PDB info PDB header:lyase Chain: B: PDB Molecule:oligo alginate lyase; PDBTitle: crystal structure of alginate lyase from agrobacterium tumefaciens c58 Resolution 2.11 Å

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		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	H	A	V	E	A	F	L	I	V	Y	D	V	T	H	D	K	K	W	L	D	R	A	I	R	V	A	S	V	I	I	H	D	V	A	R	N	N	H	Y	R	V	N	E	H	F	D	T	Q	W	N	P	L	P	D	Y	N	K	D	N	P	A	H	R	F	R	A	F	G	G	T	P	G	H	W	I	E	W	G	R
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	A	I	R	H	L	A	I	A	G	R	V	L	G	R	D	D	L	L	D	A	S	R	K	W	L	L	A	V	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	D	T	K	G	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	A	Y	N	D	E	A	G	F	R
Template Known Secondary structure															T	T																	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240															.	.	.	.	.	.	.																	.	.	250	.	.	.	.	.	.	.	.
		255	.	.	.	.	260					.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure								.	.	.	.
Query SS confidence								.	.	.	.
Query Sequence		L	M	L	H	I	H	.	.	.	.	A	A	L	E	A	R	C	E	Q	P	P	A	W	L	L	E	D	A	K	G	L	F	N	A	T	V	R	D	A	W	A	P	D	G	A	D	G	I	V	Y	T	V	D	W	E	G	K	P	V	V	R	E	R	V	R	W	P	I	V	E	A	M	G	T	A	Y	A	L	Y	T
Query Conservation								.	.	.	.
Alig confidence								.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	V	A	L	A	W	G	Y	D	W	L	Y	D	H	L	S	E	D	E	R	R	T	V	R	S	V	L	L	E	R	T	R	E	V	A	D	H	V	I	A	H	A	R	I	H	V	F	P	Y	D	S	H	.	.	.	.	.	.	.	.	.	.	.	A	V	R	S	L	S	A	V	L	T	P	A	C	I	A	L
Template Known Secondary structure													S	T	T	T	S																									T	T	S		T	T	T		T	T				.	.	.	.	.	.	.	.	.	.	.								T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.												.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		V	T	G	D	R	Q	Y	E	T	W	Y	Q	T	W	W	E	Y	C	I	K	Y	L	M	D	.	.	Y	E	N	G	S	W	W	Q
Query Conservation																										.	.
Alig confidence																										.	.
Template Conservation
Template Sequence		Q	G	E	S	D	E	A	G	E	W	L	D	Y	T	V	E	F	L	A	T	L	Y	S	P	W	A	G	T	D	G	G	W	A	E
Template Known Secondary structure		T	T	S																		T			T	T	B		T	T	S		B	T	T
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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