Job Description P32140 Confidence 96.29% Date Thu Jan 5 11:49:26 GMT 2012 Rank 33 Aligned Residues 170 % Identity 17% Template c2v8kA_ PDB info PDB header:lyase Chain: A: PDB Molecule:pectate lyase; PDBTitle: structure of a family 2 pectate lyase in complex with2 trigalacturonic acid Resolution 2.10 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.
Predicted Secondary structure																																								.	.																																					.	.	.
Query SS confidence																																								.	.																																					.	.	.
Query Sequence		F	G	W	L	G	N	K	G	Q	I	K	E	E	M	G	T	H	L	W	I	T	A	R	M	L	H	V	Y	S	V	A	A	A	M	G	R	P	G	.	.	A	Y	S	L	V	D	H	G	I	K	A	M	N	G	A	L	R	D	K	K	Y	G	G	W	Y	A	C	V	N	D	E	G	V	V	D	A	.	.	.	S
Query Conservation																																								.	.																																					.	.	.
Alig confidence																																								.	.																																					.	.	.
Template Conservation
Template Sequence		F	G	P	T	A	L	E	G	N	M	M	L	K	G	R	T	S	T	L	Y	S	E	N	A	L	M	Q	L	Q	L	G	K	D	L	G	P	Q	G	Q	D	L	L	K	W	T	V	D	G	L	K	A	F	A	K	Y	A	Y	N	D	Q	D	N	T	F	R	P	M	I	A	N	G	Q	D	L	S	N	Y	T	L	P
Template Known Secondary structure				T	T			G	G	G				T	T							T													T	G	G	G	G																					T	T	T	T							T	T	S		B		T	T				S
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		108	.	110	.													.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	Q	H	F	F	A	L	L	G	A	A	S	A	V	T	T	G	H	P	E	A	R	K	L	L	D	Y	T	I	E	I	I	E	K	Y	F	W	S	E	E	E	Q	M	C	L	E	S	W	D	E	A	F	S	K	T	E	E	Y	R	G	G	N	A	N	M
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.																										.	.	.	.	.
Template Conservation																																					.	.	.																										.	.	.	.	.
Template Sequence		R	D	G	Y	Y	G	K	K	G	T	V	L	K	P	Y	K	A	G	N	E	F	L	I	S	Y	A	R	A	Y	A	I	D	N	D	P	.	.	.	L	L	W	K	V	A	R	G	I	A	N	D	Q	G	L	G	D	I	G	T	A	P	G	K	E	.	.	.	.	.	V	K	V	N	M	D	T	T	N	S	D	P
Template Known Secondary structure		S		B	T	T	B		T	T																							S				.	.	.													T	T					T	T	B	T	T	B	S	.	.	.	.	.					T	T
Template Predicted Secondary structure																																					.	.	.																										.	.	.	.	.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.				.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420						.	.	.	.	.	.	.	.	.	430	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	V	E	A	F	L	I	V	Y	D	V	T	H	D	K	K	W	L	D	R	A	I	R	V	A	S	V	I	I	H	D	V	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	L	F	A	L	L	D	L	Y	H	A	S	Q	V	A	D	Y	R	K	L	A	E	K	I	G	D	N	I	I	K	I	R	Y	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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