Job Description P32140 Confidence 88.95% Date Thu Jan 5 11:49:26 GMT 2012 Rank 55 Aligned Residues 221 % Identity 14% Template c2jg0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:periplasmic trehalase; PDBTitle: family 37 trehalase from escherichia coli in complex with 1-2 thiatrehazolin Resolution 1.50 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	H	F	F	A	L	L	G	A	A	S	A	V	T	T	G	H	P	E	A	R	K	L	L	D	Y	T	I	E	I	I	E	K	Y	F	W	S	E	E	E	Q	M	C	L	E	S	W	D	E	A	F	S	K	T	E	E	Y	R	G	G	N	A	N	M	H	A	V	E	A	F	L	I	V	Y	D	V	T	H	D
Query Conservation
Alig confidence																	.	.																							.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.																							.																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	D	S	Y	F	T	M	L	G	L	A	E	S	G	H	.	.	W	D	K	V	A	D	M	V	A	N	F	A	H	E	I	D	T	Y	G	H	I	P	.	N	G	N	R	S	Y	Y	L	S	R	S	Q	P	P	F	.	.	.	.	.	.	.	.	.	.	.	F	A	L	M	V	E	L	L	A	Q	H	E	G	D
Template Known Secondary structure														T	T		.	.																			S	S			.	S	B	S	B	G	G	G	T	T				S			.	.	.	.	.	.	.	.	.	.	.													T
Template Predicted Secondary structure																	.	.																							.																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210												.	.	.	.	.	.	.	.	.	220	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210																		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	W	L	D	R	A	I	R	V	A	S	V	I	I	H	D	V	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	H	Y	R	V	N	E	H	F	D	T	Q	W	N	P	L	P	D	Y	N	K	D	N	P	A	H	R	F	R	A	F	G	G	T	P	G	H	W	I	E	W	G
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	A	A	L	K	Q	Y	L	P	Q	M	Q	K	E	Y	A	Y	W	M	D	G	V	E	N	L	Q	A	G	Q	Q	E	K	R	V	V	K	L	Q	D	G	T	L	L	N	R	Y	W	D	D	R	D	T	P	R	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	V	E	D	I	A	T	A
Template Known Secondary structure		.																		T	T	T		T	T			T	T				T	T					T	T	S									S			S			G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G
Template Predicted Secondary structure		.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.																280	.	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.						.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.
Query Sequence		R	L	M	L	H	I	H	A	A	L	E	A	R	C	E	Q	P	P	A	W	L	L	E	D	A	K	G	L	F	N	A	T	V	R	D	A	W	A	P	D	G	A	D	G	I	V	Y	T	V	D	W	E	G	K	P	V	V	R	E	R	V	R	W	P	I	.	.	.	.	.	V	E	A	M	G	T	A	Y	A	L
Query Conservation																																																																			.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.																						.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	N	P	N	R	P	A	T	E	I	Y	R	D	L	R	S	A	A	A	S	G	W	D	F	S	S	.	.	.	R	W	M	D	N	P	Q	Q	L	N	T	L	R	T	T	S	I	V	P	V	D	L	N	S	L	M	F	K	M	E	K	I	L	A	R	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.		T		T	T	S															T	T			S		G	.	.	.	G	G	B	S	S	T	T		G	G	G	B		G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template SS confidence
																289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.				.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		329	330	.	.	.	.	.					.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		Y	T	V	T	G	D	R	.	.	.	.	Q	Y	E	T	W	Y	Q	T	W	W	E	Y	C	I	K	Y	L	M	D	Y	E	N	G	S	W	W	Q	E	L	D	A	D	N	K	V	T	T	K	V	W	D	G	K
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.
Template Conservation
Template Sequence		S	K	A	A	G	D	N	A	M	A	N	Q	Y	E	T	L	A	N	A	R	Q	K	G	I	E	K	Y	L	W	N	D	Q	Q	G	W	Y	A	D	Y	D	L	K	S	H	K	V	R	N	Q	L	T	A	A	A
Template Known Secondary structure						T																							S			T	T	T	T							T	T	T	T							B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions