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Job DescriptionP32140
Confidence18.12%DateThu Jan 5 11:49:26 GMT 2012
Rank72Aligned Residues129
% Identity11%Templatec2eacB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alpha-fucosidase; PDBTitle: crystal structure of 1,2-a-l-fucosidase from2 bifidobacterium bifidum in complex with3 deoxyfuconojirimycin
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   114.....120..... .... 130.........140........ .150.........160.........170....... ..
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Query Sequence  FFALLGAASAVT. TGHP. . . . EARKLLDYTIEIIEKYFWS. . . EEEQMCLESWDEAFSKTEEYRGGNANMHA. . . . . . VE
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Template Sequence  PWILQNVYEAYEYSGDPALLDRVYALLKEESHFYVNYMLHKAGSSSGDRLTTGVAYSPEQGPLGTDGNTYESSLVWQMLN
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T


GGG
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   508.510.........520.........530.........540.........550.........560.........570.........580.......
 
   180......... 190.........200.........210.........220.........230...
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Query Sequence  AFLIVYDVTH. . . . . . . . . . . . . . . . . . . . . . . . . . DKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKD
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Template Sequence  DAIEAAKAKGDPDGLVGNTTDCSADNWAKNDSGNFTDANANRSWSCAKSLLKPIEVGD. SGQIKE. . . . . WYFEGALGKK
Template Known Secondary structure  TT
TT




STT

GGGG
B
TTS
BS
TTS






B
T.TSSB
S.....STTB
STTBB
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   588.590.........600.........610.........620.........630.........640..... ....650. ........660.
 
   234.....240........
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Query Sequence  NPAHRFRAFGGTPGH
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Template Sequence  KDGSTISGYQADNQH
Template Known Secondary structure  TTS
B
TT

SSS

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   662.......670......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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