Job Description P32140 Confidence 86.21% Date Thu Jan 5 11:49:26 GMT 2012 Rank 56 Aligned Residues 129 % Identity 12% Template c2b39B_ PDB info PDB header:immune system Chain: B: PDB Molecule:c3; PDBTitle: structure of mammalian c3 with an intact thioester at 3a resolution Resolution 3.00 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	H	N	R	W	L	E	Q	E	T	D	R	I	F	D	F	G	K	N	S	V	V	P	T	G	F	G	W	L	G	N	K	G	Q	I	K	E	E	M	G	T	H	L	W	I	T	A	R	M	L	H	V	Y	S	V	A	A	A	M	G	R	P	G	A	Y	S	L	V	D	H	G	I	K	A	M	N	G	A	L
Query Conservation
Alig confidence																							.	.	.								.	.	.	.	.	.	.																							.
Template Conservation																							.	.	.								.	.	.	.	.	.	.																							.
Template Sequence		Q	E	S	L	E	L	I	R	K	G	Y	T	Q	Q	L	A	F	R	Q	K	S	.	.	.	S	A	Y	A	A	F	Q	.	.	.	.	.	.	.	Y	R	P	P	S	T	W	L	T	A	Y	V	V	K	V	F	A	L	A	A	N	L	.	I	A	I	D	S	K	D	L	C	E	T	V	K	W	L	I	L	E	K
Template Known Secondary structure																	T	T	B		T	T	.	.	.	S		B		S	S	T	.	.	.	.	.	.	.	T	S																		T	T	T	.	S																		T
Template Predicted Secondary structure																							.	.	.								.	.	.	.	.	.	.																							.
Template SS confidence
		1042	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.				.	.	.	.	.	.	.								1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.		.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110
		87	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.																																		.	.	.
Query SS confidence									.	.	.	.	.	.																																		.	.	.
Query Sequence		R	D	K	K	Y	G	G	.	.	.	.	.	.	W	Y	A	C	V	N	D	E	G	V	V	D	A	S	K	Q	G	Y	Q	H	F	F	A	L	L	G	A	A	S	A	V	T	T	.	.	.	G	H	P	E	A	R	K	L	L	D	Y	T	I	E	I	I	E	K	Y	F
Query Conservation									.	.	.	.	.	.																																		.	.	.
Alig confidence									.	.	.	.	.	.																																		.	.	.
Template Conservation
Template Sequence		Q	K	P	D	G	I	F	Q	E	D	G	P	V	I	H	Q	E	M	I	G	G	F	R	D	T	R	E	K	D	V	S	L	T	A	F	V	L	I	A	L	H	E	A	K	D	I	C	E	A	Q	V	N	S	L	G	R	S	I	A	K	A	G	D	F	L	E	N	H	Y
Template Known Secondary structure		B		T	T	S		B				S				S	G	G	G	S			T	T			S	S	T	T														T	T	T	T	T	T	T	T		S	S																G
Template Predicted Secondary structure
Template SS confidence
		1111	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions