Job Description P32140 Confidence 93.77% Date Thu Jan 5 11:49:26 GMT 2012 Rank 44 Aligned Residues 259 % Identity 12% Template c1x9dA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoplasmic reticulum mannosyl-oligosaccharide 1, PDBTitle: crystal structure of human class i alpha-1,2-mannosidase in2 complex with thio-disaccharide substrate analogue Resolution 1.41 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.
Predicted Secondary structure																																																	.					.	.	.																						.	.
Query SS confidence																																																	.					.	.	.																						.	.
Query Sequence		M	L	H	V	Y	S	V	A	A	A	M	G	R	P	G	A	Y	S	L	V	D	H	G	I	K	A	M	N	G	A	L	R	D	K	K	Y	G	G	W	Y	A	C	V	N	D	E	G	.	V	V	D	A	.	.	.	S	K	Q	G	Y	Q	H	F	F	A	L	L	G	A	A	S	A	V	T	T	G	.	.	H	P
Query Conservation																																																	.					.	.	.																						.	.
Alig confidence																																																	.					.	.	.																						.	.
Template Conservation
Template Sequence		Q	L	E	F	R	E	L	S	R	L	T	G	D	K	K	F	Q	E	A	V	E	K	V	T	Q	H	I	H	G	L	S	G	K	K	D	G	L	V	P	M	F	I	N	T	H	S	G	L	F	T	H	L	G	V	F	T	L	G	A	R	A	D	S	Y	Y	E	Y	L	L	K	Q	W	I	Q	G	G	K	Q	E	T
Template Known Secondary structure															T															T		S			B	T	T	B			S				T	T	T					S	T	T				S	S	T	T	T														T	T	S
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.
Query Sequence		E	A	R	K	L	L	D	Y	T	I	E	I	I	E	K	Y	F	W	S	E	E	E	Q	M	C	L	E	S	W	D	E	A	F	S	K	T	E	E	Y	R	G	G	N	A	N	M	H	A	V	E	A	F	L	I	V	Y	D	V	T	H	D	.	.	.	.	.	K	K	W	L	D	R	A	I	R	V	A	S	V	I
Query Conservation																																																															.	.	.	.	.
Alig confidence																															.	.	.	.	.																												.	.	.	.	.
Template Conservation																															.	.	.	.	.
Template Sequence		Q	L	L	E	D	Y	V	E	A	I	E	G	V	R	T	H	L	L	R	H	S	E	P	S	K	L	T	F	V	.	.	.	.	.	G	E	L	A	H	G	R	F	S	A	K	M	D	H	L	V	C	F	L	P	G	T	L	A	L	G	V	Y	H	G	L	P	A	S	H	M	E	L	A	Q	E	L	M	E	T	C
Template Known Secondary structure																		T					T	T	T						.	.	.	.	.					T	T								G	G	G	G												T	T
Template Predicted Secondary structure																															.	.	.	.	.
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510						.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	D	V	A	R	N	N	H	Y	R	V	N	E	H	F	D	T	Q	W	N	P	L	P	D	Y	N	K	D	N	P	A	H	R	F	R	A	F	G	G	T	P	G	H	W	I	E	W	G	R	L	M	L	H	I	H	A	A	L	E	A	R	C	E	Q	P	P	A	W	L	L	E	D	A	K	G	L	F	N	A
Query Conservation
Alig confidence																																												.										.	.	.							.	.	.	.	.	.
Template Conservation																																												.										.	.	.							.	.	.	.	.	.
Template Sequence		Y	Q	M	N	R	Q	M	E	T	G	L	S	P	E	I	V	H	F	N	L	Y	P	Q	P	G	R	R	D	V	E	V	K	P	A	D	R	H	N	L	L	R	P	.	E	T	V	E	S	L	F	Y	L	.	.	.	Y	R	V	T	G	D	.	.	.	.	.	.	R	K	Y	Q	D	W	G	W	E	I	L	Q	S
Template Known Secondary structure							T	S	T	T	S				S						S	S			T	T			S		B			G	G	G			B					.										.	.	.							.	.	.	.	.	.	T
Template Predicted Secondary structure																																												.										.	.	.							.	.	.	.	.	.
Template SS confidence
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.		.	600	.	.	.	.	.	.	.				.	.	610	.	.	.							.	.	.	.	.	.	620	.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		T	V	R	D	A	W	A	P	D	.	G	A	D	G	I	V	Y	T	V	D	W	E	G	K	P	V	V	R	E	R	V	R	W	P	I	V	E	A	M	G	T	A	Y	A	L	Y
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		F	S	R	F	T	R	V	P	S	G	G	Y	S	S	I	N	N	V	Q	D	P	Q	K	P	E	P	R	D	K	M	E	S	F	F	L	G	E	T	L	K	Y	L	F	L	L	F
Template Known Secondary structure						T	B		T	T	S		B			B	S		T	T		S	S				B		S		B							T
Template Predicted Secondary structure
Template SS confidence
		627	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions