Job Description P32140 Confidence 95.09% Date Thu Jan 5 11:49:26 GMT 2012 Rank 39 Aligned Residues 175 % Identity 8% Template c1o79A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:squalene--hopene cyclase; PDBTitle: structures of human oxidosqualene cyclase inhibitors bound2 to a homolgous enzyme Resolution 2.8 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	F	G	K	N	S	V	V	P	T	G	F	G	W	L	G	N	K	G	Q	I	K	E	E	M	G	T	H	L	W	I	T	A	R	M	L	H	V	Y	S	V	A	A	A	M	G	R	P	G	A	Y	S	L	V	D	H	G	I	K	A	M	N	G	A	L	R	D	K	K	Y	G	G	W	Y	A	C	V	N	D
Query Conservation
Alig confidence																																													.	.	.																						.							.	.	.	.	.	.
Template Conservation																																													.	.	.																						.							.	.	.	.	.	.
Template Sequence		W	G	A	Y	D	V	D	N	T	S	D	L	P	N	H	I	P	F	C	D	F	G	E	V	T	D	P	P	S	E	D	V	T	A	H	V	L	E	C	F	G	S	F	.	.	.	G	Y	D	D	A	W	K	V	I	R	R	A	V	E	Y	L	K	R	E	Q	K	.	P	D	G	S	W	F	.	.	.	.	.	.
Template Known Secondary structure		B		S	S	S	S	S	B			S	S	G	G	G	S	S	S			S	S			S	B			B															.	.	.	T			T	T	S																.	T	T	S				.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.																						.							.	.	.	.	.	.
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.				460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480		.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	V	V	D	A	S	K	Q	G	Y	Q	H	F	F	A	L	L	G	A	A	S	A	V	T	T	G	H	P	E	A	R	K	L	L	D	Y	T	I	E	I	I	E	K	Y	F	W	S	E	E	E	Q	M	C	L	E	S	W	D	E	A	F	S	K	T	E	E	Y	R	G	G	N	A	N	M	H	A	V	E	A
Query Conservation
Alig confidence		.	.																					.	.	.																						.	.
Template Conservation		.	.																					.	.	.																						.	.
Template Sequence		.	.	G	R	W	G	V	N	Y	L	Y	G	T	G	A	V	V	S	A	L	K	A	.	.	.	V	G	I	D	T	R	E	P	Y	I	Q	K	A	L	D	W	V	E	Q	H	Q	.	.	N	P	D	G	G	W	G	E	D	C	R	S	Y	E	D	P	A	Y	A	G	K	G	A	S	T	P	S	Q	T	A	W	A
Template Known Secondary structure		.	.		S	S	B	S																.	.	.	T	T			T	T	S												T	T	B	.	.		T	T	S	S	B	B			G	G	G	G	T		G	G	G	T	T		S		B
Template Predicted Secondary structure		.	.																					.	.	.																						.	.
Template SS confidence
				487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.				.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.			.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	I	V	Y	D	V	T	H	D	K	K	W	L	D	R	A	I	R	V	A	S	V	I	I	H	D	V	A	R	N	N	H	Y
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		L	M	A	L	I	A	G	G	R	A	E	S	.	.	E	A	A	R	R	G	V	Q	Y	L	V	E	T	Q	R	P	D	G	G	W
Template Known Secondary structure								T	T	T	T	S	S	.	.																T	T	S
Template Predicted Secondary structure														.	.
Template SS confidence
		560	.	.	.	.	.	.	.	.	.	570	.			.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions