Job Description P32140 Confidence 95.77% Date Thu Jan 5 11:49:26 GMT 2012 Rank 36 Aligned Residues 289 % Identity 12% Template c1lf6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:glucoamylase; PDBTitle: crystal structure of bacterial glucoamylase Resolution 2.10 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	H	V	Y	S	V	A	A	A	M	G	R	P	G	A	Y	S	L	V	D	H	G	I	K	A	M	N	G	A	L	R	D	K	K	Y	G	G	W	Y	A	C	V	N	D	E	G	V	V	D	A	S	K	Q	G	Y	Q	H	F	F	A	L	L	G	A	A	S	A	V	T	T	G	H	P	E	A	R	K	L	L
Query Conservation
Alig confidence										.	.	.	.	.	.																			.																																								.	.
Template Conservation										.	.	.	.	.	.																			.																																								.	.
Template Sequence		V	A	N	A	F	I	A	A	.	.	.	.	.	.	G	D	V	D	S	A	N	R	S	L	D	Y	L	A	K	V	V	K	.	D	N	G	M	I	P	Q	N	T	W	I	S	G	K	P	Y	W	T	G	I	Q	L	D	E	Q	A	D	P	I	I	L	S	Y	R	L	K	R	Y	D	.	.	L	Y	D	S	L	V
Template Known Secondary structure										.	.	.	.	.	.	T																		.			S	S			S		B		T	T	S		B																				T	T		G	G	.	.	G	T	T	T	T
Template Predicted Secondary structure										.	.	.	.	.	.																			.																																								.	.
Template SS confidence
		348	.	350	.	.	.	.	.							.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.		.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.			.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		D	Y	T	I	E	I	I	E	K	Y	F	W	S	E	E	E	Q	M	C	L	E	S	W	D	E	A	F	S	K	T	E	E	Y	R	G	G	N	A	N	M	H	A	V	E	A	F	L	I	V	Y	D	V	T	H	D	.	.	.	.	K	K	W	L	D	R	A	I	R	V	A	S	V	I	I	H	D	V	A	R	N
Query Conservation																																																									.	.	.	.
Alig confidence																								.	.	.	.	.	.																												.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		K	P	L	A	D	F	I	I	K	I	G	P	K	T	G	Q	E	R	W	E	E	I	.	.	.	.	.	.	G	G	Y	S	P	A	T	M	A	A	E	V	A	G	L	T	C	A	A	Y	I	A	E	Q	N	K	D	Y	E	S	A	Q	K	Y	Q	E	K	A	D	N	W	Q	K	L	I	D	N	L	T	Y	T	E
Template Known Secondary structure													S	S	B	S	S		T	T	S	S		.	.	.	.	.	.		B	B																						T	T																										S
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440							.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		N	H	Y	R	V	N	E	H	F	D	T	Q	W	N	P	L	P	D	Y	N	K	D	N	P	A	H	R	F	R	A	F	G	G	T	P	G	H	W	.	I	E	W	G	R	L	M	L	H	I	H	A	A	L	E	A	R	C	E	Q	P	P	A	W	L	L	E	D	A	K	G	L	F	N	A	T	V	R	D	A	W
Query Conservation																																								.
Alig confidence																																								.																			.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.
Template Sequence		N	G	P	L	G	N	G	Q	Y	Y	I	R	I	A	G	L	S	D	P	D	A	D	F	M	I	N	I	A	N	G	G	G	V	Y	D	Q	K	E	I	V	D	P	S	F	L	E	L	V	R	L	G	V	K	S	A	D	D	.	.	.	.	.	.	.	.	P	K	I	L	N	T	L	K	V	V	D	S	T	I	K
Template Known Secondary structure		S		S	S	T	T	S					S		B	S	S	S		T	T	S							T	T	T	T					G	G	G				G	G	G	G					T	T	S	S		T	T		.	.	.	.	.	.	.	.														S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.
Template SS confidence
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.									550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.								.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																			.	.	.	.	.	.	.							.	.
Query SS confidence																			.	.	.	.	.	.	.							.	.
Query Sequence		A	P	D	G	A	D	G	I	V	Y	T	V	D	W	E	G	K	.	.	.	.	.	.	.	P	V	V	R	E	R	.	.	V	R	W	P	I	V	E	A	M	G	T	A	Y	A	L	Y	T	V	T	G	D	R	Q	Y	E	T	W	Y	Q	T	W	W	E	Y	C	I	K	Y	L	M	D	Y	E	N	G	S	W	W
Query Conservation																			.	.	.	.	.	.	.							.	.
Alig confidence																			.	.	.	.	.	.	.							.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.
Template Sequence		V	D	T	P	K	G	P	S	W	Y	R	Y	N	H	D	G	Y	G	E	P	S	K	T	E	L	Y	H	G	A	G	K	G	R	L	W	P	L	L	T	G	E	R	G	M	Y	E	I	A	A	G	K	D	A	T	P	Y	V	K	A	M	E	K	F	A	N	.	.	.	.	.	.	.	.	.	E	G	G	I	I	S
Template Known Secondary structure					T	T						S	S	T	T				S		S	B	T	T	B			S	S	S	S				B	B														T	T														S		.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.										630	.	.	.	.	.
		362	.	.	.	.	.		.	.	370	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		Q	E	L	D	A	D	.	N	K	V	T	T	K	V	W	D
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		E	Q	V	W	E	D	T	G	L	P	T	D	S	A	S	P
Template Known Secondary structure		S		B		T	T	T			B		S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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