Job Description P32140 Confidence 97.46% Date Thu Jan 5 11:49:26 GMT 2012 Rank 25 Aligned Residues 224 % Identity 14% Template c1g6iA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:class i alpha-1,2-mannosidase; PDBTitle: crystal structure of the yeast alpha-1,2-mannosidase with bound 1-2 deoxymannojirimycin at 1.59 a resolution Resolution 1.59 Å

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		60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure									.																					.	.																	.	.	.	.
Query SS confidence									.																					.	.																	.	.	.	.
Query Sequence		Y	S	V	A	A	A	M	.	G	R	P	G	A	Y	S	L	V	D	H	G	I	K	A	M	N	G	A	L	.	.	R	D	K	K	Y	G	G	W	Y	A	C	V	N	D	E	G	.	.	.	.	V	V	D	A	S	K	Q	G	Y	Q	H	F	F	A	L	L	G	A	A	S	A	V	T	T	G	H	P	E	A	R
Query Conservation									.																					.	.																	.	.	.	.
Alig confidence									.																					.	.																	.	.	.	.
Template Conservation
Template Sequence		F	K	Y	L	A	Y	L	T	G	N	R	T	Y	W	E	L	V	E	R	V	Y	E	P	L	Y	K	N	N	D	L	L	N	T	Y	D	G	L	V	P	I	Y	T	F	P	D	T	G	K	F	G	A	S	T	I	R	F	G	S	R	G	D	S	F	Y	E	Y	L	L	K	Q	Y	L	L	T	H	E	T	L	Y	Y
Template Known Secondary structure																				T	T									T						T	T			B	S				T	T	T			B		S			B		S	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190																	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	L	D	Y	T	I	E	I	I	E	K	Y	F	W	S	E	E	E	Q	M	C	L	E	S	W	D	E	A	F	S	K	T	E	E	Y	R	G	G	N	A	N	M	H	A	V	E	A	F	L	I	V	Y	D	V	T	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	W	L	D	R
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.
Template Sequence		D	L	Y	R	K	S	M	E	G	M	K	K	H	L	L	A	Q	S	K	P	S	S	L	W	Y	I	G	E	R	E	Q	G	L	Q	.	.	G	Q	L	S	P	K	M	D	H	L	V	C	F	M	G	G	L	L	A	S	G	S	T	E	G	L	S	I	H	E	A	R	R	R	P	F	F	S	K	S	D	W	D	L
Template Known Secondary structure															T					T	T	T							B	B	T	T	T	T	T	.	.	S			B					G	G	G	G	G											T	T							T	T	S	T	T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	R	V	A	S	V	I	I	H	D	V	A	R	N	N	H	Y	R	V	N	E	H	F	D	T	Q	W	N	P	L	P	D	Y	N	K	D	N	P	A	H	R	F	R	A	F	G	G	T	P	G	H	W	I	E	W	G	R	L	M	L	H	I	H	A	A	L	E	A	R	C	E	Q	P	P	A	W	L	L	E
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	G	I	T	D	T	C	Y	Q	M	Y	K	Q	S	S	S	G	L	A	P	E	I	V	V	F	N	D	G	N	I	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T	S	T	T	S				S							S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	K	G	L	F	N	A	T	V	R	D	A	W	A	P	D	G	A	D	G	I	V	Y	T	V	D	W	E	G	K	P	V	V	R	E	R	V	R	W	P	I	V	E	A	M	G	T	A	Y	A	L	Y	T	V	T	G	D	R	Q	Y	E	T	W	Y	Q	T	W	W	E	Y	C	I	K	Y	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	W	W	R	S	S	V	G	D	F	F	V	K	P	L	D	R	H	N	L	Q	R	P	.	.	.	.	.	.	.	.	E	T	V	E	S	I	M	F	M	Y	H	L	S	H	D	H	K	Y	R	E	W	G	A	E	I	A	T	S	F	F	E	N	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.						S	S	S	S					G	G	G			B					.	.	.	.	.	.	.	.																T																	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template SS confidence
														412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.									.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions