Job Description P78067 Confidence 94.16% Date Thu Jan 5 12:33:09 GMT 2012 Rank 61 Aligned Residues 68 % Identity 24% Template c3flhC_ PDB info PDB header:structural genomics, unknown function Chain: C: PDB Molecule:uncharacterized protein lp_1913; PDBTitle: crystal structure of lp_1913 protein from lactobacillus2 plantarum,northeast structural genomics consortium target3 lpr140b Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		K	P	L	T	L	D	Q	L	Q	Q	Q	N	G	K	A	I	D	T	R	P	S	A	F	Y	N	G	W	P	Q	T	L	N	G	P	S	G	H	E	L	A	A	L	N	L	S	A	S	W	L	D	K	M	S	T	E	Q	L	N	A	W	I	K	Q	H	N	L	K	T	D	A	P	V	A	L	Y	G	.	.	N	D
Query Conservation																																																																														.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.									.	.												.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.									.	.
Template Sequence		T	V	L	A	D	X	Q	N	A	T	G	K	Y	V	V	L	D	V	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	K	G	A	I	A	X	P	A	K	.	.	.	.	.	.	.	.	D	L	A	T	R	I	G	E	.	.	L	D	P	A	K	T	Y	V	V	Y	D	W	T	G	G
Template Known Secondary structure									T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T								.	.	.	.	.	.	.	.						G	G	G	.	.	S		T	T	S							T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.									.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																	.	.	.	.	.	.	.	.	.	50	.									.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		106	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		K	D	V	D	A	V	K	T	R	.	L	Q	K	A	G	L	T
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		T	T	L	G	K	T	A	L	L	V	L	L	S	A	G	F	E
Template Known Secondary structure		S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions