Job Description P78067 Confidence 100.00% Date Thu Jan 5 12:33:09 GMT 2012 Rank 2 Aligned Residues 260 % Identity 20% Template c1okgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:possible 3-mercaptopyruvate sulfurtransferase; PDBTitle: 3-mercaptopyruvate sulfurtransferase from leishmania major Resolution 2.10 Å

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.							.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																				.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		E	Q	L	V	Y	P	Q	W	L	H	D	L	Q	Q	G	K	E	V	T	A	K	P	A	G	D	W	K	V	I	E	A	A	W	G	.	.	.	.	.	.	A	P	K	L	Y	L	I	S	H	I	P	G	A	D	Y	I	D	T	N	E	V	.	.	.	.	.	.	E	S	E	P	L	W	N	K	V	S	D	E	Q
Query Conservation																																				.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.																						.	.	.	.	.	.										.
Template Conservation																.	.	.	.	.	.	.	.	.	.																																																					.
Template Sequence		K	V	F	L	D	P	S	E	V	A	D	H	L	A	.	.	.	.	.	.	.	.	.	.	E	Y	R	I	V	D	C	R	Y	S	L	K	I	K	D	H	G	S	I	Q	Y	A	K	E	H	V	K	S	A	I	R	A	D	V	D	T	N	L	S	K	L	V	P	T	S	T	A	R	H	P	L	P	.	P	A	E
Template Known Secondary structure											T	T		G	G	.	.	.	.	.	.	.	.	.	.	G	S									S	S	S	T	T	T	T	T	T								T	T						T	T	T	T	S					T	T				S	S				.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																																																					.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.											.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		L	K	A	M	L	A	K	H	G	I	R	H	D	T	T	V	I	L	Y	G	R	.	.	D	V	Y	A	A	A	R	V	A	Q	I	M	L	Y	A	G	V	K	D	V	R	L	L	D	G	G	W	Q	T	W	S	D	A	G	L	P	V	E	R	G	T	P	P	K	V	K	A	E	P	D	F	G	V	K	I	P	A
Query Conservation																							.	.
Alig confidence																							.	.																		.																																		.	.	.	.	.	.
Template Conservation																																										.																																		.	.	.	.	.	.
Template Sequence		F	I	D	W	C	X	A	N	G	X	A	G	E	L	P	V	L	C	Y	D	D	E	C	G	A	X	G	G	C	R	L	W	W	X	L	N	S	L	G	A	.	D	A	Y	V	I	N	G	G	F	Q	A	C	K	A	A	G	L	E	X	E	S	G	E	P	S	S	L	P	R	P	A	T	H	.	.	.	.	.	.
Template Known Secondary structure									T	T		S	S	S	S							S	S	T	T	T	T	T												T		.						T	T	T	T					T	T	T						S				S								.	.	.	.	.	.
Template Predicted Secondary structure																																										.																																		.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	Q	L	M	L	D	M	E	Q	A	R	G	L	L	H	R	Q	D	A	S	L	V	S	I	R	S	W	P	E	F	I	G	T	T	S	G	Y	S	Y	I	K	P	K	G	E	I	A	G	A	R	W	G	H	A	G	S	D	S	T	H	M	E	D	F	H	N	P	D	G	T	M	R	S	A	D	D	I	T	A
Query Conservation
Alig confidence																																																										.	.	.	.
Template Conservation																																																										.	.	.	.
Template Sequence		W	P	F	K	T	A	F	Q	H	H	Y	L	V	D	E	I	P	P	Q	A	I	I	T	D	A	R	S	A	D	R	F	A	S	T	V	R	P	Y	A	A	D	K	X	P	G	H	I	E	G	A	R	N	L	P	Y	T	.	.	.	.	S	H	L	V	T	R	G	D	G	K	V	L	R	S	E	E	E	I	R	H
Template Known Secondary structure				S		S	S			S	B			G	G	G	S		T	T							S						T			S	S			T	T		S	S	S	S		S	T	T						G	G	.	.	.	.	G	G					S	S	S
Template Predicted Secondary structure																																																										.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.					.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	W	K	A	W	N	I	K	P	E	Q	Q	V	S	F	Y	C	G	T	G	W	R	A	S	E	T	F	M	Y	A	R	A	M	G	W	K	N	V	S	V	Y	D	G	G	W	Y	E	W	S	S	D	P	K	N	P	V	A
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		N	I	X	T	.	V	V	Q	A	D	L	S	S	F	V	F	S	G	S	G	V	T	A	C	I	N	I	A	L	V	H	H	L	G	L	G	H	P	Y	L	Y	C	G	S	W	S	E	Y	S	G	L	F	R	P	P	I	X
Template Known Secondary structure					T	.	T						T	T	S						S	S	T											T	T	S							S	S									T
Template Predicted Secondary structure						.
Template SS confidence
		232	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions