Return to main results Retrieve Phyre Job Id

Job DescriptionP77256
Confidence100.00%DateThu Jan 5 12:26:53 GMT 2012
Rank29Aligned Residues271
% Identity24%Templated1ah4a_
SCOP infoTIM beta/alpha-barrel NAD(P)-linked oxidoreductase Aldo-keto reductases (NADP)
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.... ..
Predicted Secondary structure 



































......

Query SS confidence 







































































. . . . . .

Query Sequence  KIPLGTTDITLSRMGLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTAPGYNFGNSEVIVGQALKK. . . . . . LP
Query Conservation   
 

 

  

 




   
                 
  
   


 



  

 
 

  

 

  ......  
Alig confidence 



















..........



























...










......

Template Conservation      
 

  

 




  ..........         
  
   


 



  

...

  

  
          
Template Sequence  SHLVLYTGAKMPILGLGTWK. . . . . . . . . . SPPGKVTEAVKVAIDLGYRHIDCAHVYQ. . . NENEVGLGLQEKLQGQVVK
Template Known Secondary structure 

TTS
SB

TT..........

T



GGGS...
TTSS
Template Predicted Secondary structure 









..........











...





Template SS confidence 















































































   2.......10.........20. ........30.........40......... 50.........60........
 
   77..80.........90.........100.........110.........120.........130........ .140
Predicted Secondary structure 


































................

Query SS confidence 





























































. . . . . . . . . . . . . . . .

Query Sequence  REQVVVETKCGIVWERKGSLFNKVGDRQLYKNLSPESIREEVAASLQRLGIDYIDIYMTHWQ. . . . . . . . . . . . . . . . SV
Query Conservation 
    
 

                        
   
      

  
  
 


  

  ................  
Alig confidence 











..................































................

Template Conservation 
    
 

   ..................          
   

 

  
 


  

 
                  
Template Sequence  REDLFIVSKLWC. . . . . . . . . . . . . . . . . . TDHEKNLVKGACQTTLRDLKLDYLDLYLIHWPTGFKPGKDPFPLDGDGNV
Template Known Secondary structure  GGG

G..................GG
SGGGT
S
BS

S

B

SS
SS
B
TTSSB
Template Predicted Secondary structure 







..................






























Template SS confidence 















































































   6970.........80 .........90.........100.........110.........120.........130
 
   141........150.........160.........170.........180... ......190.........200.........210........
Predicted Secondary structure 













..















Query SS confidence 










































. .


































Query Sequence  PPFFTPIAETVAVLNELKSEGKIRAIGAANVDADHIREYLQYG. . ELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYS
Query Conservation               
  
   
 

 



      
       ..                            
      
Alig confidence 










































..


































Template Conservation          
    
  
   
 
   


             
                             

      
Template Sequence  VPDESDFVETWEAMEELVDEGLVKAIGVSNFNHLQVEKILNKPGLKYKPAVNQIEVHPYLTQEKLIEYCKSKGIVVTAYS
Template Known Secondary structure 
B
S

TSBS
S

T
TT

S

S
BTTB

T

Template Predicted Secondary structure 









































Template SS confidence 















































































   131........140.........150.........160.........170.........180.........190.........200.........210
 
   219220.........230.........240.........250.........260.........270.........280.........290........
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  PLEQGLLTGTITRDYVPGGARANKVWFQRENMLKVIDMLEQWQPLCARYQCTIPTLALAWILKQSDLISILSGATAPEQV
Query Conservation   
  
 
                                  
  

     
 

 

   
    
  

 
      
Alig confidence 



















...................



























..










Template Conservation   
  
 
             ...................  
  

     
 

 

 
 
    
..

 
 
  
 
Template Sequence  PLGSPDRPWAKPEDPSLLED. . . . . . . . . . . . . . . . . . . PRIKAIAAKYNKTTAQVLIRFPMQRNLI. . VIPKSVTPERI
Template Known Secondary structure  TT

TT
TT

TTS

GGG
...................TS
TT
..

B


Template Predicted Secondary structure 



















...................





..




Template SS confidence 















































































   211........220.........230 .........240.........250........ .260.........
 
   299300.........310.........320.....
Predicted Secondary structure 






Query SS confidence 


























Query Sequence  RENVAALNINLSDADATLMREMAEALE
Query Conservation   


 
    
       
  
     
Alig confidence 


























Template Conservation   


 
    

 

   
       
Template Sequence  AENFQVFDFELSPEDMNTLLSYNRNWR
Template Known Secondary structure  TTTTTT



TT




Template Predicted Secondary structure 








Template SS confidence 


























   270.........280.........290......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions