Job Description P77256 Confidence 100.00% Date Thu Jan 5 12:26:53 GMT 2012 Rank 39 Aligned Residues 257 % Identity 26% Template c3krbB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:aldose reductase; PDBTitle: structure of aldose reductase from giardia lamblia at 1.75a resolution Resolution 1.75 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.									.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.
Query Sequence		L	S	R	M	G	L	G	T	W	A	I	G	G	G	P	A	W	N	G	D	L	D	R	Q	I	C	I	D	T	I	L	E	A	H	R	C	G	I	N	L	I	D	T	A	P	G	Y	N	F	G	N	S	E	V	I	V	G	Q	A	L	K	K	L	.	.	.	.	.	.	.	.	P	R	E	Q	V	V	V	E	T
Query Conservation																																																																	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.																													.	.	.													.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Sequence		P	P	R	L	G	F	G	T	W	Q	.	.	.	.	.	.	.	.	.	.	A	P	P	E	A	V	Q	T	A	V	E	T	A	L	M	T	G	Y	R	H	I	D	C	A	Y	V	Y	Q	.	.	.	N	E	E	A	I	G	R	A	F	G	K	I	F	K	D	A	S	S	G	I	K	R	E	D	V	W	I	T	S
Template Known Secondary structure				S	B					T	T	.	.	.	.	.	.	.	.	.	.																	T								G	G	G	S	.	.	.														T		G	G	G	S			G	G	G
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																													.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.											.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.																			140	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	C	G	I	V	W	E	R	K	G	S	L	F	N	K	V	G	D	R	Q	L	Y	K	N	L	S	P	E	S	I	R	E	E	V	A	A	S	L	Q	R	L	G	I	D	Y	I	D	I	Y	M	T	H	W	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	P	F	F	T	P
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	W	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	H	R	P	E	L	V	R	E	Q	C	K	K	T	M	S	D	L	Q	V	D	Y	L	D	L	F	L	V	H	W	P	L	A	F	V	R	N	D	V	G	D	L	F	P	K	D	A	E	G	R	A	M	L	E	K	V	P
Template Known Secondary structure					G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G		S																T		S										S			B				T	T			S	S		B		T	T	S		B		B
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.																			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	E	T	V	A	V	L	N	E	L	K	S	E	G	K	I	R	A	I	G	A	A	N	V	D	A	D	H	I	R	E	Y	L	Q	Y	G	E	L	D	I	I	Q	A	K	Y	S	I	L	D	R	A	M	E	N	E	L	L	P	L	C	R	D	N	G	I	V	V	Q	V	Y	S	P	L	E	Q	G	L	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	D	T	W	R	A	M	E	Q	L	V	E	E	G	L	V	K	H	I	G	V	S	N	Y	T	V	P	L	L	A	D	L	L	N	Y	A	K	I	K	P	L	V	N	Q	I	E	I	H	P	W	H	P	N	D	A	T	V	K	F	C	L	D	N	G	I	G	V	T	A	Y	S	P	M	G	G	S	Y	A	T
Template Known Secondary structure																T	S								S														S	S			S							B	T	T	B												T	T							S	T	T			S	B
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		G	T	I	T	R	D	Y	V	P	G	G	A	R	A	N	K	V	W	F	Q	R	E	N	M	L	K	V	I	D	M	L	E	Q	W	Q	P	L	C	A	R	Y	Q	C	T	I	P	T	L	A	L	A	W	I	L	K	Q	S	D	L	I	.	.	S	I	L	S	G	A	T	A	P	E	Q	V	R	E	N	V	A	A
Query Conservation																																																														.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	I	L	E	C	K	T	L	K	A	I	A	D	A	K	G	T	S	P	H	C	V	A	L	A	W	H	V	K	K	W	N	T	S	M	Y	S	V	I	P	K	S	Q	T	P	A	R	I	E	A	N	F	K	C
Template Known Secondary structure			B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	G												T	S														T		S	T	T						B		S	S								G	G	G
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.																								.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	I	N	L	S	D	A	D	A	T	L	M	R	E	M	A	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	V	Q	L	S	D	D	D	M	D	A	I	N	N	I	H	L	N
Template Known Secondary structure		G	G													T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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