Job Description P77256 Confidence 56.39% Date Thu Jan 5 12:26:53 GMT 2012 Rank 48 Aligned Residues 163 % Identity 12% Template c3ik4A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from herpetosiphon aurantiacus Resolution 2.10 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	L	D	R	Q	I	C	I	D	T	I	L	E	A	H	R	C	G	I	N	L	I	D	T	A	P	G	Y	N	F	G	N	S	E	V	I	V	G	Q	A	L	K	K	L	P	R	E	Q	V	V	V	E	T	K	C	G	I	V	W	E	R	K	G	S	L	F	N	K	V	G	D	R	Q	L	Y	K	N	L	S
Query Conservation
Alig confidence																																																		.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	G	D	E	V	H	A	A	A	S	A	K	A	I	L	A	R	G	I	K	S	I	K	V	K	T	A	G	V	D	V	A	Y	D	L	A	R	L	R	A	I	H	Q	A	A	P	T	.	.	.	.	.	A	P	L	I	V	D	G	N	C	G	Y	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S															T	T										S	S																S	S	S	.	.	.	.	.								T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		P	E	S	I	R	E	E	V	A	A	S	L	Q	R	L	G	I	D	Y	I	D	I	Y	M	T	H	W	Q	S	V	P	P	F	F	T	P	I	A	E	T	V	A	V	L	N	E	L	K	S	E	.	G	K	I	R	A	I	G	A	A	N	V	D	A	D	H	I	R	E	Y	L	Q	Y	G	E	L	D	I	I	Q
Query Conservation																																																				.
Alig confidence		.	.	.	.	.																													.	.	.	.	.	.	.											.
Template Conservation		.	.	.	.	.																													.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	E	R	A	L	A	F	C	A	A	C	K	A	E	S	I	P	M	V	L	F	E	Q	P	L	P	R	E	D	.	.	.	.	.	.	.	W	A	G	M	A	Q	V	T	A	Q	S	G	F	A	V	A	A	D	E	S	A	R	S	A	H	D	V	L	R	I	A	R	E	G	T	A	S	V	I	N
Template Known Secondary structure		.	.	.	.	.													T	T										S		T	T		.	.	.	.	.	.	.											S	S	S					S	T	T		S	S											T			S
Template Predicted Secondary structure		.	.	.	.	.																													.	.	.	.	.	.	.
Template SS confidence
							199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.								.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	Y	S	I	L	D	R	A	M	E	N	E	L	L	P	L	C	R	D	N	G	I	V	V	Q	V	Y	S	P	L	E	Q	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	L	M	K	A	G	V	A	E	G	L	K	M	I	A	I	A	Q	A	A	G	L	G	L	M	I	G	G	M	V	E	S	I	L
Template Known Secondary structure																							T								S	S
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions