Job Description P77256 Confidence 100.00% Date Thu Jan 5 12:26:53 GMT 2012 Rank 38 Aligned Residues 262 % Identity 24% Template c1vbjB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:prostaglandin f synthase; PDBTitle: the crystal structure of prostaglandin f synthase from2 trypanosoma brucei Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	K	I	P	L	G	T	T	D	I	T	L	S	R	M	G	L	G	T	W	A	I	G	G	G	P	A	W	N	G	D	L	D	R	Q	I	C	I	D	T	I	L	E	A	H	R	C	G	I	N	L	I	D	T	A	P	G	Y	N	F	G	N	S	E	V	I	V	G	Q	A	L	K	K	L	P	R	E	Q	V
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.																																							.
Template Conservation																										.	.	.	.	.	.	.	.	.																																							.
Template Sequence		L	T	Q	S	L	K	L	S	N	G	V	M	M	P	V	L	G	F	G	M	W	K	L	Q	.	.	.	.	.	.	.	.	.	D	G	N	E	A	E	T	A	T	M	W	A	I	K	S	G	Y	R	H	I	D	T	A	A	I	Y	K	N	E	E	S	A	G	R	A	I	A	S	.	C	G	V	P	R	E	E	L
Template Known Secondary structure									T	T	S					S	B					T	T			.	.	.	.	.	.	.	.	.	T	T												T	T	T								G	G	G	T												.	S	S	S		G	G	G
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																																							.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.										.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	E	T	K	C	G	I	V	W	E	R	K	G	S	L	F	N	K	V	G	D	R	Q	L	Y	K	N	L	S	P	E	S	I	R	E	E	V	A	A	S	L	Q	R	L	G	I	D	Y	I	D	I	Y	M	T	H	W	Q	S	V	P	P	F	F	T	P	I	A	E	T	V	A	V	L	N	E	L	K	S	E
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Template Sequence		F	V	T	T	K	L	W	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	Q	G	Y	E	S	T	L	S	A	F	E	K	S	I	K	K	L	G	L	E	Y	V	D	L	Y	L	I	H	W	P	G	K	.	.	.	.	D	K	F	I	D	T	W	K	A	F	E	K	L	Y	A	D
Template Known Secondary structure									G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G		S															T	T		S								S			T	T	.	.	.	.	T	T														T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80																			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	I	R	A	I	G	A	A	N	V	D	A	D	H	I	R	E	Y	L	Q	Y	G	E	L	D	I	I	Q	A	K	Y	S	I	L	D	R	A	M	E	N	E	L	L	P	L	C	R	D	N	G	I	V	V	Q	V	Y	S	P	L	E	Q	G	L	L	T	G	T	I	T	R	D	Y	V	P	G	G	A	R	A
Query Conservation
Alig confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	V	R	A	I	G	V	S	N	F	H	E	H	H	I	E	E	L	L	K	H	C	K	V	A	P	M	V	N	Q	I	E	L	H	P	L	L	N	Q	K	A	L	C	E	Y	C	K	S	K	N	I	A	V	T	A	W	S	P	L	G	Q	G	H	L	V	E	D	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	S								S										T	T	S		S	S										B	T	T	B												T	T							S	T	T	G	G	G	T	S	T	T		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	V	W	F	Q	R	E	N	M	L	K	V	I	D	M	L	E	Q	W	Q	P	L	C	A	R	Y	Q	C	T	I	P	T	L	A	L	A	W	I	L	K	Q	S	D	L	I	S	I	L	S	G	A	T	A	P	E	Q	V	R	E	N	V	A	A	L	N	I	N	L	S	D	A	D	A	T	L	M	R	E	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	L	K	A	I	G	G	K	Y	G	K	T	A	A	Q	V	M	L	R	W	E	I	Q	A	G	V	I	.	.	T	I	P	K	S	G	N	E	A	R	I	K	E	N	G	N	I	F	D	F	E	L	T	A	E	D	I	Q	V	I	D	G	M
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T														T	T			.	.						S												S	S													T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template SS confidence
																			199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		321	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	A	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	G	H	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions