Job Description P77256 Confidence 18.79% Date Thu Jan 5 12:26:53 GMT 2012 Rank 91 Aligned Residues 176 % Identity 14% Template c1sjaA_ PDB info PDB header:lyase, isomerase Chain: A: PDB Molecule:n-acylamino acid racemase; PDBTitle: x-ray structure of o-succinylbenzoate synthase complexed2 with n-acetylmethionine Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	P	L	G	T	T	D	I	T	L	S	R	M	G	L	G	T	W	A	I	G	G	G	P	A	W	N	G	D	L	D	R	Q	I	C	I	D	T	I	L	E	A	H	R	C	G	I	N	L	I	D	T	A	P	G	Y	N	F	G	N	S	E	V	I	V	G	Q	A	L	K	K	L	P	R	E	Q	V	V	V
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		A	A	E	L	G	S	V	R	D	S	V	P	C	G	V	S	V	G	I	M	.	.	.	.	.	.	.	.	.	.	D	T	I	P	Q	L	L	D	V	V	G	G	Y	L	D	E	G	Y	V	R	I	K	L	K	I	.	.	E	P	G	W	D	V	E	P	V	R	A	V	R	E	R	F	G	D	D	V	L	L	Q
Template Known Secondary structure						T				S				B								.	.	.	.	.	.	.	.	.	.	S	S															T		S							.	.	B	T	T	B	S													S	S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.											140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	K	C	G	I	V	W	E	R	K	G	S	L	F	N	K	V	G	D	R	Q	L	Y	K	N	L	S	P	E	S	I	R	E	E	V	A	A	S	L	Q	R	L	G	I	D	Y	I	D	I	Y	M	T	H	W	Q	S	V	P	P	F	F	T	P	I	A	E	T	V	A	V	L	N	E	L	K	S	E	G	K
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Template Sequence		V	D	A	N	T	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	G	D	A	P	Q	L	A	R	L	D	P	F	G	L	L	L	I	E	Q	P	L	E	E	E	D	V	L	G	.	.	.	.	.	.	.	H	A	E	L	A	R	R	I	Q
Template Known Secondary structure					T	T		B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G						T	T	G	G	G			S						B		T	T					.	.	.	.	.	.	.					T	T	T		S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.																												.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.								.	.	.	.	.	230	.	.	.
		163		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure			.																																	.
Query SS confidence			.																																	.
Query Sequence		I	.	R	A	I	G	A	A	N	V	D	A	D	H	I	R	E	Y	L	Q	Y	G	E	L	D	I	I	Q	A	K	Y	S	I	L	.	D	R	A	M	E	N	E	L	L	P	L	C	R	D	N	G	I	V	V	Q	V	Y	S	P	L	E	Q	G	L
Query Conservation			.																																	.
Alig confidence			.																																	.
Template Conservation
Template Sequence		T	P	I	C	L	D	E	S	I	V	S	A	R	A	A	A	D	A	I	K	L	G	A	V	Q	I	V	N	I	K	P	G	R	V	G	G	Y	L	E	A	R	R	V	H	D	V	C	A	A	H	G	I	P	V	W	C	G	G	M	I	E	T	G	L
Template Known Secondary structure		S					S	T	T			S											T			S						T	T	T	T	T	S														T	T									S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions