Job Description P33937 Confidence 100.00% Date Thu Jan 5 11:52:56 GMT 2012 Rank 19 Aligned Residues 589 % Identity 40% Template d2jioa2 SCOP info Formate dehydrogenase/DMSO reductase, domains 1-3 Formate dehydrogenase/DMSO reductase, domains 1-3 Formate dehydrogenase/DMSO reductase, domains 1-3 Resolution 2.2

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	I	K	W	D	K	A	P	C	R	F	C	G	T	G	C	G	V	L	V	G	T	Q	Q	G	R	V	V	A	C	Q	G	D	P	D	A	P	V	N	R	G	L	N	C	I	K	G	Y	F	L	P	K	I	M	Y	G	K	D	R	L	T	Q	P	L	L	R	M	K	N	G	K	Y	D	K	E	G	E	F	T
Query Conservation
Alig confidence																																								.																														.	.	.	.	.
Template Conservation																																								.																														.	.	.	.	.
Template Sequence		R	P	E	K	W	V	K	G	V	C	R	Y	C	G	T	G	C	G	V	L	V	G	V	K	D	G	K	A	V	A	I	Q	G	D	P	N	N	H	.	N	A	G	L	L	C	L	K	G	S	L	L	I	P	V	L	N	S	K	E	R	V	T	Q	P	L	V	R	R	.	.	.	.	.	H	K	G	G	K	L	E
Template Known Secondary structure				S								S	S		T	T										T	T									T	T	S	T	.	T	T	T								T								S		S			S					S	.	.	.	.	.	S	T	T
Template Predicted Secondary structure																																								.																														.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70						.	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	T	W	D	Q	A	F	D	V	M	E	E	K	F	K	T	A	L	K	E	K	G	P	E	S	I	G	M	F	G	S	G	Q	W	T	I	W	E	G	Y	A	A	S	K	L	F	K	A	G	F	R	S	N	N	I	D	P	N	A	R	H	C	M	A	S	A	V	V	G	F	M	R	T	F	G	M	D	E	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	S	W	D	E	A	L	D	L	M	A	S	R	F	R	S	S	I	D	M	Y	G	P	N	S	V	A	W	Y	G	S	G	Q	C	L	T	E	E	S	Y	V	A	N	K	I	F	K	G	G	F	G	T	N	N	V	D	G	N	P	R	L	C	M	A	S	A	V	G	G	Y	V	T	S	F	G	K	D	E	P
Template Known Secondary structure																									G	G	G							T	T	S															T	T								G	G	G	G	T	T												S	S		S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	C	Y	D	D	I	E	Q	A	D	A	F	V	L	W	G	A	N	M	A	E	M	H	P	I	L	W	S	R	I	T	N	R	R	L	S	N	Q	N	V	T	V	A	V	L	S	T	Y	Q	H	R	S	F	E	L	A	D	N	G	I	I	F	T	P	Q	S	D	L	V	I	L	N	Y	I	A	N	Y	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	G	T	Y	A	D	I	D	Q	A	T	C	F	F	I	I	G	S	N	T	S	E	A	H	P	V	L	F	R	R	I	A	R	R	K	Q	V	E	P	G	V	K	I	I	V	A	D	P	R	R	T	N	T	S	R	I	A	D	M	H	V	A	F	R	P	G	T	D	L	A	F	M	H	S	M	A	W	V	I	I
Template Known Secondary structure		S	S		G	G	G	G	G	T		S						S							S															T	T								S	S			G	G	G	G	G		S							T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	N	A	I	N	Q	D	F	F	S	K	H	V	N	L	R	K	G	A	T	D	I	G	Y	G	L	R	P	T	H	P	L	E	K	A	A	K	N	P	G	S	D	A	S	E	P	M	S	F	E	D	Y	K	A	F	V	A	E	Y	T	L	E	K	T	A	E	M	T	G	V	P	K	D	Q	L	E	Q	L	A
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	E	E	L	D	N	P	R	F	W	Q	R	Y	V	N	F	M	D	A	E	G	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	F	E	G	Y	K	A	F	L	E	N	Y	R	P	E	K	V	A	E	I	C	R	V	P	V	E	Q	I	Y	G	A	A
Template Known Secondary structure			T	T		S														T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											G	G	G										T	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260																									.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	Y	A	D	P	N	K	K	V	I	S	Y	W	T	M	G	F	N	Q	H	T	R	G	V	W	A	N	N	L	V	Y	N	L	H	L	L	T	G	K	I	S	Q	P	G	C	G	P	F	S	L	T	G	Q	P	S	A	C	G	T	A	R	E	V	G	T	F	A	H	R	L	P	A	D	M	V	V	T	N	E
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		R	A	F	A	E	S	A	A	T	M	S	L	W	.	C	M	G	I	N	Q	R	V	Q	G	V	F	A	N	N	L	I	H	N	L	H	L	I	T	G	Q	I	C	R	P	G	A	T	S	F	S	L	T	G	Q	P	N	A	C	G	G	V	R	D	G	G	A	L	S	H	L	L	P	A	G	R	A	I	P	N	A
Template Known Secondary structure							S	S	S						.						S	S	T	T																T			S	B	T	T	B								S	S	S					T	T	T	T	T		S	T	T			T	T	T			T	T
Template Predicted Secondary structure															.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.		.	.	.	.	.	.	510	.	.	.		.
Predicted Secondary structure																																																																					.											.
Query SS confidence																																																																					.											.
Query Sequence		K	H	R	D	I	C	E	K	K	W	N	I	P	S	G	T	I	P	A	K	I	G	L	H	A	V	A	Q	D	R	A	L	K	D	G	K	L	N	V	Y	W	T	M	C	T	N	N	M	Q	A	G	P	N	I	N	E	E	R	M	P	G	W	R	D	P	R	N	.	F	I	I	V	S	D	P	Y	P	T	.	V
Query Conservation																																																																					.											.
Alig confidence																																																												.	.								.											.
Template Conservation																																																												.	.
Template Sequence		K	H	R	A	E	M	E	K	L	W	G	L	P	E	G	R	I	A	P	E	P	G	Y	H	T	V	A	L	F	E	A	L	G	R	G	D	V	K	C	M	I	I	C	E	T	N	P	A	H	T	L	P	N	L	N	K	V	H	.	.	K	A	M	S	H	P	E	S	F	I	V	C	I	E	A	F	P	D	A	V
Template Known Secondary structure												T			T	T		S		S	S															T	S	S							S							S	S	S						.	.			T	T		T	T								S		T	T		G
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430			.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	L	A	A	D	L	I	L	P	T	A	M	W	V	E	K	E	G	A	Y	G	N	A	E	R	R	T	Q	F	W	R	Q	Q	V	Q	A	P	G	E	A	K	S	D	L	W	Q	L	V	Q	F	S	R	R	F	K	T	E	E	V	W	P	E	D	L	L	A	K	K	P	E	L	R	G	K	T	L	Y	E	V
Query Conservation
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	E	Y	A	D	L	V	L	P	P	A	F	W	C	E	R	D	G	V	Y	G	C	G	E	R	R	Y	S	L	T	E	K	A	V	D	P	P	G	Q	C	R	P	T	V	N	T	L	V	E	F	A	R	R	A	G	V	D	P	Q	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	G	T		S					B			G	G	G	S							T	T	S									S				T	T		B													T	T			G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
		595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.			.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.					.
Predicted Secondary structure																																																	.	.																											.	.	.	.
Query SS confidence																																																	.	.																											.	.	.	.
Query Sequence		L	Y	A	T	P	E	V	S	K	F	P	V	S	E	L	A	E	D	Q	L	N	D	E	S	R	E	L	G	F	Y	L	Q	K	G	L	F	E	E	Y	A	W	F	G	R	G	H	G	.	.	H	D	L	A	P	F	D	D	Y	H	K	A	R	G	L	R	W	P	V	V	N	G	K	E	T	Q	.	.	.	.	W
Query Conservation																																																	.	.																											.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.																											.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	R	N	A	E	D	V	W	N	E	W	R	M	V	S	K	G	T	T	Y	D	F	W	G	M	T	R	E	R	L	R	K	E	S	G	L	I	W	P	C	P	S	E	D	H	P	G	T	S	L	R	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S													T	T	S	T	T			T	T									S	S				S				S	T	T					S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																													513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
		669	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	S	E	G	N	D	P	Y	V	K	A	G	E	G	Y	K	F	Y	G	K	P	D	G	K	A	V	I	F	A	L	P	F	E	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	G	Q	D	P	C	V	P	A	D	H	P	D	R	F	F	F	Y	G	K	P	D	G	R	A	V	I	W	M	R	P	A	K	G
Template Known Secondary structure		B	T	T	T		T	T	S		T	T		S	S	S	B			T	T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600