Job Description P33937 Confidence 78.94% Date Thu Jan 5 11:52:56 GMT 2012 Rank 92 Aligned Residues 145 % Identity 13% Template c3fxaA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:sis domain protein; PDBTitle: crystal structure of a putative sugar-phosphate isomerase2 (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 a3 resolution Resolution 1.60 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		D	Q	A	F	D	V	M	E	E	K	F	K	T	A	L	K	E	K	G	P	E	.	S	I	G	M	F	G	S	G	Q	W	T	I	W	E	G	Y	A	A	S	K	L	F	K	A	G	F	R	S	N	N	I	D	P	N	A	R	H	C	M	A	S	A	V	V	G	F	M	R	T	F	G	M	D	E	P	M	G	C
Query Conservation																							.
Alig confidence															.	.	.	.	.	.			.																								.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.																											.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	A	L	V	K	T	V	E	K	I	A	E	.	.	.	.	.	.	C	T	G	K	I	V	V	A	G	C	G	T	S	G	V	A	A	K	K	L	V	H	S	F	N	C	.	.	I	E	R	P	A	V	F	L	T	P	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	H	G	T
Template Known Secondary structure															.	.	.	.	.	.		S	S								T																.	.	T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	G
Template Predicted Secondary structure															.	.	.	.	.	.																											.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80																	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																											.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	D	D	I	E	Q	A	D	A	F	V	L	W	G	A	N	M	A	E	M	H	P	I	L	W	S	R	I	T	N	R	R	L	S	N	Q	N	V	T	V	A	.	V	L	S	T	Y	Q	H	R	S	F	E	L	A	D	N	G	I	I	F	T	P	Q	S	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																											.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.						.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.
Template Sequence		L	G	V	L	Q	K	E	D	I	L	I	L	I	S	K	G	G	N	T	G	E	L	L	N	L	I	P	A	C	K	T	K	.	.	.	.	G	S	T	L	I	G	V	T	E	N	P	D	S	V	I	A	K	E	A	D	I	F	F	P	V	S	V	S	K	E	P	D	P	F	N	X	L	A	T	A	S	T	X	A
Template Known Secondary structure		G	G	G			T	T								S	S	S							T	T								.	.	.	.	T								S		T	T	S							S								S				S	T	T	S		S
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
				266	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure		.	.														.
Query SS confidence		.	.														.
Query Sequence		.	.	V	I	L	N	Y	I	A	N	Y	I	I	Q	N	.	N	A	I	N	Q	D	F	F	S	K	H	V	N	L	R
Query Conservation		.	.														.
Alig confidence		.	.														.
Template Conservation
Template Sequence		V	I	A	S	F	D	A	V	I	V	C	L	X	T	Y	X	N	Y	T	K	E	Q	F	S	V	I	H	P	G	G	A
Template Known Secondary structure																	T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions