Job Description P33937 Confidence 96.71% Date Thu Jan 5 11:52:56 GMT 2012 Rank 42 Aligned Residues 147 % Identity 12% Template c3etnD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:putative phosphosugar isomerase involved in capsule PDBTitle: crystal structure of putative phosphosugar isomerase involved in2 capsule formation (yp_209877.1) from bacteroides fragilis nctc 93433 at 1.70 a resolution Resolution 1.70 Å

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	W	D	Q	A	F	D	V	M	E	E	K	F	K	T	A	L	K	E	K	G	P	E	S	I	G	M	F	G	S	G	Q	W	T	I	W	E	G	Y	A	A	S	K	L	F	K	A	G	F	R	S	N	N	I	D	P	N	A	R	H	C	M	A	S	A	V	V	G	F	M	R	T	F	G	M	D	E	P	M
Query Conservation
Alig confidence																			.	.	.	.	.																										.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.																										.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	Y	E	K	A	V	E	L	I	V	E	Q	I	H	R	K	.	.	.	.	.	K	G	K	L	V	T	S	G	X	G	K	A	G	Q	I	A	X	N	I	A	T	T	F	C	S	.	.	T	G	I	P	S	V	F	L	H	P	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	H
Template Known Secondary structure		T													T	T	T	T	.	.	.	.	.									S																	.	.	T	T								T	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																			.	.	.	.	.																										.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.																	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																															.																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	C	Y	D	D	I	E	Q	A	D	A	F	V	L	W	G	A	N	M	A	E	M	H	P	I	L	W	S	R	I	T	N	R	R	L	S	N	Q	N	V	T	V	A	V	L	.	S	T	Y	Q	H	R	S	F	E	L	A	D	N	G	I	I	F	T	P	Q	S	D	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																															.																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.														.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.
Template Sequence		G	D	L	G	I	L	Q	E	N	D	L	L	L	L	I	S	N	S	G	K	T	R	E	I	V	E	L	T	Q	L	.	.	A	H	N	L	N	P	G	L	K	F	I	V	I	T	G	N	P	D	S	P	L	A	S	E	S	D	V	C	L	S	T	G	H	P	A	E	V	C	T	L	G	X	T	P	T	T	S	T
Template Known Secondary structure		T	G	G	G	G			T	T								S	S	S												.	.						T	T								S		T	T	S						S	S												S	T	T	S		S	S	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
					265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	L	V	I	L	N	Y	I	A	N	Y	I	I	Q	N	N	A	I	N	Q	D	F	F	S	K	H
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		T	V	X	T	V	I	G	D	I	L	V	V	Q	T	X	K	R	T	E	F	T	I	E	E	Y	S	K	R
Template Known Secondary structure																				T								T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions