Job Description P33937 Confidence 95.85% Date Thu Jan 5 11:52:56 GMT 2012 Rank 45 Aligned Residues 150 % Identity 13% Template c2yvaB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa Resolution 1.85 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	A	F	D	V	M	E	E	K	F	K	T	A	L	K	E	K	G	P	E	S	I	G	M	F	G	S	G	Q	W	T	I	W	E	G	Y	A	A	S	K	L	F	K	A	G	F	R	S	N	N	I	D	P	N	A	R	H	C	M	A	S	A	V	V	G	F	M	R	T	F	G	M	D	E	P	M	G	C	Y
Query Conservation
Alig confidence																			.	.
Template Conservation																			.	.
Template Sequence		P	D	A	I	S	R	A	A	M	T	L	V	Q	S	L	L	N	.	.	G	N	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V	L	T	A	I	A	N	D	R	L	H	D	E	V	Y	A	K
Template Known Secondary structure																		T	.	.	T								S	T															T		S	S	S										S	S										T	T	S	T	T	G	G	G	T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		201	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.					.	.	.	.	.	.	.	260	.	.	.	.	.	.					.	.	.
Predicted Secondary structure								.	.	.																																															.	.	.	.															.	.	.	.
Query SS confidence								.	.	.																																															.	.	.	.															.	.	.	.
Query Sequence		D	D	I	E	Q	A	.	.	.	D	A	F	V	L	W	G	A	N	M	A	E	M	H	P	I	L	W	S	R	I	T	N	R	R	L	S	N	Q	N	V	T	V	A	V	L	S	T	Y	Q	H	R	S	F	E	L	.	.	.	.	A	D	N	G	I	I	F	T	P	Q	S	D	L	V	.	.	.	.	I	L	N
Query Conservation								.	.	.																																															.	.	.	.															.	.	.	.
Alig confidence								.	.	.																						.	.	.	.																						.	.	.	.								.							.	.	.	.
Template Conservation																																.	.	.	.																																	.
Template Sequence		Q	V	R	A	L	G	H	A	G	D	V	L	L	A	I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	.	.	.	.	A	V	T	R	D	M	T	I	V	A	L	T	G	Y	D	G	G	E	L	A	G	L	L	G	P	Q	D	V	E	I	R	I	.	P	S	H	R	S	A	R	I	Q	E	M	H	M
Template Known Secondary structure									T	T								S	S	S												.	.	.	.				T	T									T	T										T	T							.	S		S
Template Predicted Secondary structure																																.	.	.	.																																	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.
		270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	A	N	Y	I	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	V	N	C	L	C	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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