Job Description P33937 Confidence 24.16% Date Thu Jan 5 11:52:56 GMT 2012 Rank 163 Aligned Residues 50 % Identity 20% Template c2yujA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:ubiquitin fusion degradation 1-like; PDBTitle: solution structure of human ubiquitin fusion degradation2 protein 1 homolog ufd1 Resolution UNK

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		714	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	L	S	T	G	R	V	L	E	H	W	H	T	G	S	M	T	R	R	V	P	E	L	H	R	A	F	P	E	A	V	L	F	I	H	P	L	D	A	K	A	R	D	L	R	R	G	D	K	V	K	V	V	S	R	R
Query Conservation
Alig confidence																							.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		F	K	L	T	N	K	N	S	D	R	M	T	H	C	G	V	L	E	F	V	A	.	.	.	.	.	.	.	D	E	G	I	C	Y	L	P	H	W	M	M	Q	N	L	L	L	E	E	G	G	L	V	Q	V	E	S	V	N
Template Known Secondary structure							T	T	T	T													.	.	.	.	.	.	.	B	T	T	B					S							T			T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.								.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions