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Job DescriptionP33937
Confidence100.00%DateThu Jan 5 11:52:56 GMT 2012
Rank8Aligned Residues688
% Identity19%Templatec2e7zA_
PDB info PDB header:lyaseChain: A: PDB Molecule:acetylene hydratase ahy; PDBTitle: acetylene hydratase from pelobacter acetylenicus
Resolution1.26 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60 .........70...... ...80.........90.........100.........110.........
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Query Sequence  DKAPCRFCGTGCGVLVGTQ. QGRVVACQGDPDAPVN. RGLNCIKGYFLPKIMYGKDRLTQPLLRMKNGKYDKEGEFTPIT
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Template Sequence  KHVVCQSCDINCVVEAEVKADGKIQTKSISEPHPTTPPNSICMKSVNADTIRTHKDRVLYPLKNVGS. . KRGEQRWERIS
Template Known Secondary structure 

SSTT


TTS

SS

SSS
TT


TT
TT


S

SS..STT




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   5....10.........20.........30.........40.........50.........60.........70. ........80..
 
   120.........130.........140.........150.........160.........170.........180.........190.........
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Query Sequence  WDQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYAASKLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGC
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Template Sequence  WDQALDEIAEKLKKIIAKYGPESLGVSQTEINQQSEYGTLRRFMN. LLGSPNWTSAMYMCIGNTAGVHRVTHG. . . . SYS
Template Known Secondary structure 
GGG
GGGT


TT.T



GGGGTTS....S
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   83......90.........100.........110.........120....... ..130.........140.........150.... ...
 
   200.........210.........220.........230.........240.........250.........260.........270.........
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Query Sequence  YDDIEQADAFVLWGANMAEMHPILWSRITNRRLSNQNVTVAVLSTYQHRSFELADNGIIFTPQSDLVILNYIANYIIQNN
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Template Sequence  FASFADSNCLLFIGKNLSNHNWVSQFNDLKA. ALKRGCKLIVLDPRRTKVAEMADIWLPLRYGTDAALFLGMINVIINEQ
Template Known Secondary structure 
TTT
SS


BTTBS.T

SS


S


TT
TT
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   158.160.........170.........180........ .190.........200.........210.........220.........230......
 
   280.........290.........300.........310.........320.........330.........340.........350.........
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Query Sequence  AINQDFFSKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVAEYTLEKTAEMTGVPKDQLEQLAQLY
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Template Sequence  LYDKEFVENWC. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VGFEELKERVQEYPLDKVAEITGCDAGEIRKAAVMF
Template Known Secondary structure 
S
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TT




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   237..240....... ..250.........260.........270.........280...
 
   360.........370.........380.........390.........400.........410.........420... ......
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Query Sequence  ADPNKKVISYWTMGFNQHTRGVWANNLVYNLHLLTGKISQPGCGPFSLTGQPSACGTAREVGTF. . . . . . . . . . AHRLPA
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Template Sequence  ATESPASIPW. AVSTDMQKNSCSAIRAQCILRAIVGSFVNGAEILGAPHSDLVPISKIQMHEALPEEKKKLQLGTETYPF
Template Known Secondary structure  SSS


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SGGGSSTTTTTTSSS
BS
TTS

TTGGGS

TTTTT
GG
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   284.....290... ......300.........310.........320.........330.........340.........350.........360..
 
   430.........440.........450.........460 .........470.........480.........490.........500......
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Query Sequence  DMVVTNEKHRDICEKKWNIPSGTIPAKIGLH. . . AVAQDRALKDGKLNVYWTMCTNNMQAGPNINEERMPGWRDPRNFII
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Template Sequence  LTYTGMSALEEPSERVYGVKYFHNMGAFMANPTALFTAMATEKPYPVKAFFALASNALMGYANQQNAL. . KGLMNQDLVV
Template Known Secondary structure  GSGGGS
SS


SS
S




SS


S

GGGSSS
..T
S
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   363......370.........380.........390.........400.........410.........420.........430 .........440
 
   507..510.........520.........530.........540. ........550.........560.........570.........580....
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Query Sequence  VSDPYPTVSALAADLILPTAMWVEKEGAYGNAERR. . TQFWRQQVQAPGEAKSDLWQLVQFSRRFKTEEVWPEDLLAKKP
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Template Sequence  CYDQFMTPTAQLADYVLPGDHWLERPVVQPNWEGIPFGNTSQQVVEPAGEAKDEYYFIRELAVRMGLEEHFPW. . . . . . .
Template Known Secondary structure  SS

TTGGG
SB

GGG

B
S
SSTB
S
B


S

STT
B
TT
GGG


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   441........450.........460.........470.........480.........490.........500.........510...
 
   585....590.........600.........610.........620.........630.........640.........650.........660....
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Query Sequence  ELRGKTLYEVLYATPEVSKFPVSELAEDQLNDESRELGFYLQKGLFEEYAWFGRGHGHDLAPFDDYHKARGLRWPVVNGK
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Template Sequence  . . . . KDRLELINYRISPTGMEWEEYQKQYTYMSK. . . . . . . . . . . . . . . . . . . . . . . . . . . . LPDYFGPEGVGVATPSGK
Template Known Secondary structure  ....
STGGGT

TTSS

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SSTT



SSSSSS
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   514.....520.........530.........540... ......550.........560.
 
   665....670.........680.........690.........700.........710.........720.........730.........740....
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Query Sequence  ETQWRYSEGNDPYVKAGEGYKFYGKPDGKAVIFALPFEPAAEAPDEEYDLWLSTGRVLEHWHTGSMTRRVPELHRAFPEA
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Template Sequence  VELYSSVFEKLGYDPLPYYHEPLQTEI. . . . . . . . . . . . SDPELAKEYPLILFAGL. REDSNFQSCYHQPGILRDAEPDP
Template Known Secondary structure  SS
TS
SS





SSSTT............T
S


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TT
BTTBS
STTS
S
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   562.......570.........580........ .590.........600..... ....610.........620........
 
   745....750.........760.........770.........780.........790....... ..800.......
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Query Sequence  VLFIHPLDAKARDLRRGDKVKVVSRRGEVISIVETRGRNRPPQGLVYMPFFDA. . . . . . . . . . . . . . . . . AQLVNKLTLD
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Template Sequence  VALLHPKTAQSLGLPSGEWIWVETTHGRLKLLLKHDGAQPE. . GTIRIPHGRWCPEQEGGPETGFSGAMLHNDAMVLSDD
Template Known Secondary structure 
T

TTS
SS

TTS
T..T
SS


TTS

SGGGTTTT
GGGG


S
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   629630.........640.........650.........660......... 670.........680.........690.........700......
 
   808.810......... 820.......
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Query Sequence  . . ATDPLSKETDFK. KCAVKLEK
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Template Conservation      

 

         
 
 
Template Sequence  DWNLDPEQGLPNLRGGILAKAYK
Template Known Secondary structure  GGGB
TTT

B

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   707..710.........720.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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