Job Description P33937 Confidence 91.85% Date Thu Jan 5 11:52:56 GMT 2012 Rank 68 Aligned Residues 182 % Identity 10% Template c2a3nA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:putative glucosamine-fructose-6-phosphate aminotransferase; PDBTitle: crystal structure of a putative glucosamine-fructose-6-phosphate2 aminotransferase (stm4540.s) from salmonella typhimurium lt2 at 1.353 a resolution Resolution 1.23 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	F	D	V	M	E	E	K	F	K	T	A	L	K	E	K	G	P	E	S	I	G	M	F	G	S	G	Q	W	T	I	W	E	G	Y	A	A	S	K	L	F	K	A	G	F	R	S	N	N	I	D	P	N	A	R	H	C	M	A	S	A	V	V	G	F	M	R	T	F	G	M	D	E	P	M	G	C	Y	D
Query Conservation
Alig confidence														.	.	.	.													.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.													.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	K	A	E	Q	V	A	D	E	I	Y	Q	.	.	.	.	A	G	F	S	S	L	F	F	A	S	V	G	.	G	S	L	A	P	X	X	A	I	N	E	F	A	K	E	L	T	T	L	P	V	Y	V	E	Q	A	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	H	K	G	N	K
Template Known Secondary structure														.	.	.	.				S								G	.	G	G																	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T
Template Predicted Secondary structure														.	.	.	.													.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.																	80	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.						.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																											.																									.	.	.	.	.
Query SS confidence																																											.																									.	.	.	.	.
Query Sequence		D	I	E	Q	A	D	A	F	V	L	W	G	A	N	M	A	E	M	H	P	I	L	W	S	R	I	T	N	R	R	L	S	N	Q	N	V	T	V	A	V	L	.	S	T	Y	Q	H	R	S	F	E	L	A	D	N	G	I	I	F	T	P	Q	S	D	L	V	.	.	.	.	.	I	L	N	Y	I	A	N	Y	I
Query Conservation																																											.																									.	.	.	.	.
Alig confidence																																.	.	.	.								.																									.	.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		R	L	N	K	D	S	V	V	I	T	L	S	K	S	G	D	T	K	E	S	V	A	I	A	E	W	C	K	A	Q	.	.	.	.	G	I	R	V	V	A	I	T	K	N	A	D	S	P	L	A	Q	A	A	T	W	H	I	P	X	R	H	K	N	G	V	E	Y	E	Y	X	L	L	Y	W	L	F	F	R	V	L
Template Known Secondary structure		T			T	T								S	S	S															T	.	.	.	.	T								S		T	T	S					T		S								S	S
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	N	N	A	I	N	Q	D	F	F	S	K	H	V	N	L	R	K	G	A	T	D	I	G	Y	G	L	R	P	T	H	P	L	E	K	A	A	K	N	P	G	S	D	A	S	E	P	M	S	F	E	D	Y	K	A	F	V	A	E	Y	T	L	E	K	T	A	E	M	T	G	V	P	K	D	Q	L	E	Q	L
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		S	R	N	N	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	Y	D	R	F	A	S	Q	L	E	I	.	L	P	A	N	L	L	K	A	K	Q	K	F	D	P	Q	A	D	A	I
Template Known Secondary structure				T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								G	G	G	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		163	.	.	.	.	.																																											.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	Y	A	D	P	N	K	K	V	I	S	Y	W	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	R	Y	H	N	S	D	Y	X	X	W	V	G	G	A
Template Known Secondary structure						T	T		S								G
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions