Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA73
Confidence4.06%DateThu Jan 5 11:12:05 GMT 2012
Rank29Aligned Residues305
% Identity8%Templated1pw4a_
SCOP infoMFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter
Resolution3.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LALTTAICWGALPIAM. . . . KQVLEVMEPPTIVFYRFLMASIGLGAILAVKKRLPPLRVFRKPRWLILLAVATAGLFGNF
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Template Conservation   
        
                         
                                           
Template Sequence  FLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPL
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   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   87..90.........100.........110.........120... ......130..
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Query Sequence  ILFSSSLQYLSPTASQVIGQLSPVGMMVASVFILKEK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MRSTQVVGA
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Template Conservation                                                                                  
Template Sequence  LFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYL
Template Known Secondary structure  T

STT
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   175....180.........190.........200.........210.........220.........230.........240.........250....
 
   133......140.........150.........160.........170.........180.........190.........200.........210..
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Query Sequence  LMLLSGLVMFFNTSLVEIFTKLTDYTWGVIFGVGAATVWVSYGVAQKVLLRRLASPQILFLLYTLCTIALFPLAKPGVIA
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Template Conservation                                            
 
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Template Sequence  LRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFR. . GNRGATGVFFMTLVTIATIVYWMNPAG
Template Known Secondary structure  BTTBS


TST..T
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TT
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   268.270.........280.........290.........300.........310........ .320.........330.........340.....
 
   213......220.........230.........240.........250.........260.........270....... ..280.........290.
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Query Sequence  QLSHWQLACLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFARP. MLNLLGYLGAFVVV
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Template Conservation              
                       
   
         
        
 
    
             
Template Sequence  NPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSI
Template Known Secondary structure 
TTS
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   346...350.........360.........370.........380.........390.........400.........410.........420.....
 
   292.......300.........310.......
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Query Sequence  AGAMYSAIGHRIWGGLRKHTTVVSQP
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Template Conservation                        

 
Template Sequence  LAVILLIVVMIGEKRRHEQLLQELVP
Template Known Secondary structure  GGGGGS

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   426...430.........440.........450.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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