Job Description P0AA73 Confidence 5.10% Date Thu Jan 5 11:12:05 GMT 2012 Rank 21 Aligned Residues 144 % Identity 6% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	A	G	I	G	I	L	L	A	L	T	T	A	I	C	W	G	A	L	P	I	A	M	K	Q	V	L	E	V	M	E	P	P	T	I	V	F	Y	R	F	L	M	A	S	I	G	L	G	A	I	L	A	V	K	K	R	L	P	P	L	R	V	F	R	K	P	R	W	L	I	L	L	A	V	A	T	A	G	L
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		T	N	P	V	H	A	L	L	Y	L	I	I	S	.	.	L	L	A	I	S	G	V	F	F	S	L	G	A	Y	F	A	G	A	L	E	I	I	V	Y	A	G	A	I	M	V	L	F	V	F	V	V	M	M	L	N	L	G	G	S	E	I	E	Q	E	R	Q	W	L	K	P	Q	V	W	I	G	P	A	I	L	S
Template Known Secondary structure			S												.	.											T	T											T																			S	S	T	T						T	T		S
Template Predicted Secondary structure															.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	N	F	I	L	F	S	S	S	L	Q	Y	L	S	P	T	A	S	Q	V	I	G	Q	L	S	P	V	G	M	M	V	A	S	V	F	I	L	K	E	K	M	R	S	T	Q	V	V	G	A	L	M	L	L	S	G	L	V	M	F	F	N	T	S	L	V	E	I	F	T
Query Conservation
Alig confidence																				.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		A	I	M	L	V	V	I	V	Y	A	I	L	G	V	N	D	Q	G	.	.	.	.	I	D	G	T	P	I	S	A	K	A	V	G	I	T	L	F	G	P	Y	V	L	A	V	E	L	A	S	M	L	L	L	A	G	L	V	V	A	F	H	V	G	R	E	E	R	A	G	E
Template Known Secondary structure													T	T	S					.	.	.	.																T	T	T	S																												S	S
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions