Job Description P0AA73 Confidence 6.61% Date Thu Jan 5 11:12:05 GMT 2012 Rank 15 Aligned Residues 166 % Identity 7% Template c2gfpA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:multidrug resistance protein d; PDBTitle: structure of the multidrug transporter emrd from2 escherichia coli Resolution 3.50 Å

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		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	K	L	T	D	Y	T	W	G	V	I	F	G	V	G	A	A	T	V	W	V	S	Y	G	V	A	Q	K	V	L	L	R	R	L	A	S	P	Q	I	L	F	L	L	Y	T	L	C	T	I	A	L	F	P	L	A	K	P	G	V	I	A	Q	L	S	H	W	Q	L	A	C	L	I	F	C	G	L	N	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	L	N	V	R	E	G	A	V	Q	S	V	M	G	A	Y	L	L	T	Y	G	V	S	Q	L	F	Y	G	P	I	S	D	R	V	G	R	R	P	V	I	L	V	G	M	S	I	F	M	L	A	T	L	V	A	V	T	T	S	S	L	T	V	L	I	A	A	S	A	M	Q	G	M	G	T	G	V	G	G	V
Template Known Secondary structure		T	T	S	S	S	T	T																			T	T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	Y	G	A	L	A	E	A	M	A	R	W	Q	A	A	Q	V	S	A	I	I	T	L	T	P	L	F	T	L	F	F	S	D	L	L	S	L	A	W	P	D	F	F	A	R	P	M	L	N	L	L	G	Y	L	G	A	F	V	V	V	A	G	A	M	Y	S	A	I	G	H	R	I	W	G	G	L	R	K	H
Query Conservation
Alig confidence																																								.	.	.	.	.
Template Conservation																																								.	.	.	.	.
Template Sequence		M	A	R	T	L	P	R	D	L	Y	E	R	T	Q	L	R	H	A	N	S	L	L	N	M	G	I	L	V	S	P	L	L	A	P	L	I	G	G	.	.	.	.	.	L	L	D	T	M	W	N	W	R	A	C	Y	L	F	L	L	V	L	C	A	G	V	T	F	S	M	A	R	W	M	P	E	T	R	P	V	D
Template Known Secondary structure													T	S	S			S																						.	.	.	.	.		S	S																										S	S				S	T	T	T
Template Predicted Secondary structure																																								.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		311	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	V	V	S	Q	P	R	A	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	R	T	R	L	L	T	S	Y	K
Template Known Secondary structure							T	T	T		S	T
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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