Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA73
Confidence17.18%DateThu Jan 5 11:12:05 GMT 2012
Rank7Aligned Residues62
% Identity19%Templatec2akhZ_
PDB info PDB header:protein transportChain: Z: PDB Molecule:preprotein translocase sece subunit; PDBTitle: normal mode-based flexible fitted coordinates of a non-2 translocating secyeg protein-conducting channel into the3 cryo-em map of a secyeg-nascent chain-70s ribosome complex4 from e. coli
Resolution14.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280.........290.........300....... ..310.........320.
Predicted Secondary structure 








.......





Query SS confidence 















































. . . . . . .













Query Sequence  LFFSDLLSLAWPDFFARPMLNLLGYLGAFVVVAGAMYSAIGHRIWGGL. . . . . . . RKHTTVVSQPRAGE
Query Conservation   
   

       

 
 
     

  


 
  
  
        .......              
Alig confidence 















































.......













Template Conservation   
  
    
             
    
   
 
  
   
  
     
  
   









 
Template Sequence  VVVALLLVAIVGNYLYRDIMLPLRALAVVILIAAAGGVALLTTKGKATVAFAREARTEVRKVIWPTRQE
Template Known Secondary structure  GGGTSSSSSS



TTGGGTTS






SS
STTT



Template Predicted Secondary structure 











Template SS confidence 




































































   21........30.........40.........50.........60.........70.........80.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions