 |
Job Description | P76555 | Confidence | 98.38% | Date | Thu Jan 5 12:24:33 GMT 2012 |
Rank | 67 | Aligned Residues | 74 |
% Identity | 19% | Template | d1uika2 |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| Germin/Seed storage 7S protein
|
Resolution | 2.30 |
|
 |
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | |
|
. | 170 | |
. | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | |
|
|
|
|
. | . | . | |
|
. | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|
| . |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |  |  |  | . | . |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | M | A | A | G | F | M | Q | W | E | N | A | F | . |
. |
F | P | . |
W | T | L | N | Y | D | E | I | D | M | V | L | E | G | E | L | H | V | R | H | E | G | . |
. |
. |
. |
. |
Q | T | M | . |
. |
I | A | K | A | G | D | V | M | F | I | P | K | G | S | S | I | E | F | G | T | T | S | S | V | K | F | L | Y | V | A |
Query Conservation |   |
  |
|   |   |
|   |   |   |   |
|   |
|
| . | . |
|   | . |
|
|
|   |   |
|
|
|   |
|
|
|
|
|   |
|   |
|   |   |
|
| . | . | . | . | . |   |   |   | . | . |   |
|   |
|
|
|   |
|   |
|
|
|
|   |   |
|   |   |   |   |   |
|   |
|
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|
|   |
|   |   |
|   |   |
|   |   |
|   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
D | V | F | L | S | V | V | D | M | N | E | G | A | L | F | L | P | H | F | N | S | K | A | I | V | V | L | V | I | N | E | G | E | A | N | I | E | L | V | G | I | P | L | E | V | R | K | Y | R | A | E | L | S | E | Q | D | I | F | V | I | P | A | G | Y | P | V | V | V | N | A | T | S | D | L | N | F | F | A | F | G |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |
| T | T |
|
|  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
391 | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 |
  |
  |   |
226 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
W | P | A | N |
Query Conservation |   |
  |
|
|   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |   |   |   |
Template Sequence |   |
I | N | A | E |
Template Known Secondary structure |   |
 | T |
| T |
Template Predicted Secondary structure |   |
 |
|
|
|
Template SS confidence |   |
|
|
|
|
  |   |
483 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|