 |
Job Description | P76555 | Confidence | 75.75% | Date | Thu Jan 5 12:24:33 GMT 2012 |
Rank | 135 | Aligned Residues | 61 |
% Identity | 20% | Template | d1nxma_ |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| dTDP-sugar isomerase
|
Resolution | 1.30 |
|
 |
  |   |
171 | . | . | |
. | . | . | . | . | . | 180 | . | . | . | |
. | . | . | . | . | . | 190 | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
 |  |  | . |
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | T | L | . |
N | Y | D | E | I | D | M | V | L | E | . |
G | E | L | H | V | R | H | E | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | T | M | I | A | K | A | G | D | V | M | F | I | P | K | G | S | S | I | E | F | G | T | T | S | S | V | K | F | L | Y | V | A | W | P | A | N | W | Q |
Query Conservation |   |
|
|
| . |   |   |
|
|
|   |
|
|
|
| . |
|   |
|   |
|   |   |
|
| . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |
|
|
|   |
|   |
|
|
|
|   |   |
|   |   |   |   |   |
|   |
|
|   |
|
|
|   |   |
|
|   |
|   |
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |
|
|
|   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|   |
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |
|   |
|
|
|
|   |   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |
|   |
Template Sequence |   |
L | H | A | E | P | W | D | K | Y | I | S | V | A | D | G | G | K | V | L | G | T | W | V | D | L | R | E | G | E | T | F | G | N | T | Y | Q | T | V | I | D | A | S | K | S | I | F | V | P | R | G | V | A | N | G | F | Q | V | L | S | D | F | V | A | Y | S | Y | L | V | N | D | Y | W | A |
Template Known Secondary structure |   |
 |  |  |
| S | S |
|  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |
| B | S | S | T | T | T | T |
|  |  |  |  |  |  |
| T | T |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  | S | S |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|