Job Description P76555 Confidence 94.42% Date Thu Jan 5 12:24:33 GMT 2012 Rank 115 Aligned Residues 66 % Identity 15% Template c3uyjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific demethylase 8; PDBTitle: crystal structure of jmjd5 catalytic core domain in complex with2 nickle and alpha-kg Resolution 2.35 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190																																		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure															.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	M	Q	W	E	N	A	F	F	P	W	T	L	.	N	Y	D	E	I	D	M	V	L	E	G	E	L	H	V	R	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	Q	T	M	I	A	K	A	G	D	V	M	F	I	P
Query Conservation															.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	F	G	P	Q	G	T	I	S	P	L	H	Q	D	P	Q	Q	N	F	L	V	Q	V	M	G	R	K	Y	I	R	L	Y	S	P	Q	E	S	G	A	L	Y	P	H	N	T	S	Q	V	D	V	E	N	P	D	L	E	K	F	P	K	F	A	K	A	P	F	L	S	C	I	L	S	P	G	E	I	L	F	I	P
Template Known Secondary structure						T	T									S	S									S									G	G	G	G	G	G	G		B			B	B	S	S		T	T	S			T	T	T		T	T	S	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	S	S	I	E	F	G	T	T	S	S	V	K	F	L	Y	V	A	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	Y	W	H	Y	V	R	A	L	D	L	S	F	S	V	S	F	W	W
Template Known Secondary structure		T	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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