 |
Job Description | P76555 | Confidence | 94.87% | Date | Thu Jan 5 12:24:33 GMT 2012 |
Rank | 113 | Aligned Residues | 73 |
% Identity | 21% | Template | c2xdvA_ |
PDB info |
PDB header:nuclear protein | Chain: A: PDB Molecule:myc-induced nuclear antigen; |
PDBTitle: crystal structure of the catalytic domain of flj14393
|
Resolution | 2.57 Å |
|
 |
  |   |
161 | . | . | . | . | . | . | . | |
. | 170 | . | . | . | |
. | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
| . |
|
|  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | M | Q | W | E | N | A | F | . |
F | P | W | T | L | . |
N | Y | D | E | I | D | M | V | L | E | G | E | L | H | V | R | H | E | G | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | M | I | A | K | A | G | D | V | M | F | I | P | K | G | S | S | I | E | F | G | T | T | S |
Query Conservation |   |
  |   |   |   |
|   |
|
| . |
|   |
|
|
| . |   |   |
|
|
|   |
|
|
|
|
|   |
|   |
|   |   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|
|
|   |
|   |
|
|
|
|   |   |
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|   |   |
|   |   |
|
|   |
|   |   |
|
|
|   |   |
|   |   |
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |
Template Sequence |   |
Y | I | T | P | A | G | S | Q | G | L | P | P | H | Y | D | D | V | E | V | F | I | L | Q | L | E | G | E | K | H | W | R | L | Y | H | P | T | V | P | L | A | R | E | Y | S | V | E | A | E | E | R | I | G | R | P | V | H | E | F | M | L | K | P | G | D | L | L | Y | F | P | R | G | T | I | H | Q | A | D | T | P | A |
Template Known Secondary structure |   |
 |  |  |
| T | T |
| B |
| S |
| S |  |  |
| S | S |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |
|
| S | S | T | T |
| S | S |
|  |  |
|
| T | T | T | S |
| S |
| S |  |  |  |  |  |
| T | T |
|  |  |  |  |
| T | T |
|  |  |  |  |  |
|
| S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
218 | . | 220 | . | . | . | . | . | . | . | . | |
. | 230 | . | . | . |
Predicted Secondary structure |   |
. | . | . | . |
|  |  |  |  |  |  |  |
|
|
| . |
|  |  |
|
|
Query SS confidence |   |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
S | V | K | F | L | Y | V | A | W | P | A | . |
N | W | Q | S | L |
Query Conservation |   |
. | . | . | . |   |
|
|   |
|
|
|   |   |
|
| . |   |
|   |   |
|
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
G | L | A | H | S | T | H | V | T | I | S | T | Y | Q | N | N | S | W | G | D | F |
Template Known Secondary structure |   |
S | S |
|
|  |  |  |  |  |  |  |  |
| T | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
247 | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|