 |
Job Description | P76555 | Confidence | 98.85% | Date | Thu Jan 5 12:24:33 GMT 2012 |
Rank | 44 | Aligned Residues | 94 |
% Identity | 18% | Template | c2d40C_ |
PDB info |
PDB header:oxidoreductase | Chain: C: PDB Molecule:putative gentisate 1,2-dioxygenase; |
PDBTitle: crystal structure of z3393 from escherichia coli o157:h7
|
Resolution | 2.41 Å |
|
 |
  |   |
131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
|
|
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | F | G | R | F | D | G | A | E | P | H | C | V | G | L | T | D | L | V | T | G | D | D | G | S | S | M | A | A | G | F | M | Q | W | E | N | A | F | . |
. |
. |
F | P | W | T | L | N | Y | D | E | I | D | M | V | L | E | G | E | L | H | V | R | H | E | G | Q | T | M | I | A | K | A | G | D | V | M | F | I | P | K |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|
| . | . | . |
|   |
|
|
|   |   |
|
|
|   |
|
|
|
|
|   |
|   |
|   |   |
|
|   |   |   |   |
|   |
|
|
|   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |
|   |
| . |   |   |   |
|
|   |   |
|
|   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |
Template Sequence |   |
L | G | D | A | D | E | W | D | G | Y | K | X | R | Y | V | N | P | V | T | G | G | Y | P | X | P | S | X | G | A | F | L | Q | L | L | P | K | G | F | A | S | R | V | A | R | T | . |
T | D | S | T | I | Y | H | V | V | E | G | S | G | Q | V | I | I | G | N | E | T | F | S | F | S | A | K | D | I | F | V | V | P | T |
Template Known Secondary structure |   |
T | S |
|
| B | T | T | T | B |  |  |  |  |
|
|
| T | T | T | S | S |
| S | S | S | S |
|  |  |  |  |  |  |  |
| T | T |
| B |
|
|
| B |  |  | . | S | S |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  | T | T |  |  |  |  |  |  | T | T |
|  |  |  |  |
| T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
| . |
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | |
. | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . |
  |
  |   |
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | S | S | I | E | F | G | T | T | S | S | V | K | F | L | Y | V | A |
Query Conservation |   |
|   |   |
|   |   |   |   |   |
|   |
|
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |
|
|   |   |
|   |   |
|   |
Template Sequence |   |
W | H | G | V | S | F | Q | T | T | Q | D | S | V | L | F | S | F | S |
Template Known Secondary structure |   |
T |
|
|  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
309 | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|