Job Description P76773 Confidence 51.40% Date Thu Jan 5 12:25:21 GMT 2012 Rank 33 Aligned Residues 164 % Identity 13% Template d3prna_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.90

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		A	S	D	Q	G	E	V	M	L	R	V	G	Y	N	F	D	M	G	A	G	I	M	L	T	N	T	Y	N	F	Q	R	E	D	E	L	K	H	G	.	Y	N	E	I	E	G	W	Y	P	L	F	K	P	T	D	K	L	T	I	Q	P	G	G	L	I	N	D	K	S	I	G	S	G	G	A	V	Y	L	D	V	N
Query Conservation																																								.
Alig confidence																			.	.	.																			.										.					.
Template Conservation																			.	.	.																													.					.
Template Sequence		G	A	L	D	N	Y	N	G	I	A	V	T	Y	S	I	S	G	.	.	.	V	N	L	Y	L	S	Y	V	D	P	D	Q	T	V	D	S	S	L	V	T	E	E	F	G	I	A	A	D	.	W	S	N	D	.	M	I	S	L	A	A	A	Y	T	T	D	A	G	G	I	V	D	N	D	I	A	F	V	G	A	A
Template Known Secondary structure		S	T	T	T	T											S	S	.	.	.										T	T	T	T	S		G	G	G	S										.				S	.	S										S	G	G	G		T	T
Template Predicted Secondary structure																			.	.	.																													.					.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	F	V	P	W	F	N	L	T	V	R	N	R	Y	N	H	N	N	Y	S	S	T	D	L	S	G	E	L	D	N	N	D	T	Y	E	I	G	T	Y	W	N	F	K	I	T	D	K	F	S	Y	T	F	E	P	H	Y	F	M	R	V	N	D	F	N	S	S	N	G	K	D	H	H	W	E	I	T	N	T	F
Query Conservation
Alig confidence						.													.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Template Conservation						.													.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Template Sequence		Y	K	F	N	.	D	A	G	T	V	G	L	N	W	Y	D	N	.	.	.	.	.	.	.	.	.	.	.	.	G	L	S	T	A	G	D	Q	V	T	L	Y	G	N	Y	A	F	G	A	T	T	V	R	A	Y	V	S	D	I	D	.	.	.	.	.	.	.	.	.	R	A	G	A	D	T	A	Y	G	I	G	A
Template Known Secondary structure					S	.	S	S											.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	T	T		S											T	T												.	.	.	.	.	.	.	.	.	S	T	T
Template Predicted Secondary structure						.													.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.													.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.										.	.	.	.	250	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	R	I	N	E	H	W	L	P	Y	F	E	L	R	W	L	D	R	N	V	E	P	Y	H	R	E	Q	N	Q	I	R	I	G	T	K	Y	F	F
Query Conservation
Alig confidence																		.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.
Template Sequence		D	Y	Q	F	A	E	G	V	K	V	S	G	S	V	Q	S	.	.	.	.	.	.	.	G	F	A	N	E	T	V	A	D	V	G	V	R	F	D	F
Template Known Secondary structure							T	T										.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.								.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions