Job Description P76773 Confidence 17.58% Date Thu Jan 5 12:25:21 GMT 2012 Rank 44 Aligned Residues 167 % Identity 13% Template d2vdfa1 SCOP info Transmembrane beta-barrels OMPT-like Outer membrane adhesin/invasin OpcA Resolution 1.95

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.										.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																																		.																		.
Query SS confidence																					.	.	.	.	.	.	.	.	.																																		.																		.
Query Sequence		F	D	M	G	A	G	I	M	L	T	N	T	Y	N	F	Q	R	E	D	.	.	.	.	.	.	.	.	.	E	L	K	H	G	Y	N	E	I	E	G	W	Y	P	L	F	K	P	T	D	K	L	T	I	Q	P	G	G	L	I	N	D	K	.	S	I	G	S	G	G	A	V	Y	L	D	V	N	Y	K	F	V	.
Query Conservation																					.	.	.	.	.	.	.	.	.																																		.																		.
Alig confidence																					.	.	.	.	.	.	.	.	.															.	.	.																	.																		.
Template Conservation																																												.	.	.
Template Sequence		F	D	A	N	Q	G	I	R	L	E	A	G	F	G	R	S	K	K	N	I	I	N	L	E	T	D	E	N	K	L	G	K	T	K	N	V	K	L	P	T	G	V	.	.	.	P	E	N	R	I	D	L	Y	T	G	Y	T	Y	T	Q	T	L	S	D	S	L	N	F	R	V	G	A	G	L	G	F	E	S	S	K
Template Known Secondary structure		S	S	S	S																										T	S	S									S		.	.	.																			T	T
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	W	F	N	L	T	V	R	N	R	Y	N	H	N	N	Y	S	S	T	D	L	S	G	E	L	D	N	N	D	T	Y	E	I	G	T	Y	W	N	F	K	I	T	D	K	F	S	Y	T	F	E	P	H	Y	F	M	R	V	N	D	F	N	S	S	N	G	K	D	H	H	W	E	I	T	N	T	F	R	Y	R	I
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	S	I	L	H	S	S	R	Q	S	W	L	A	K	V	.	.	.	.	.	.	.	.	.	.	.	.	H	A	D	L	L	S	Q	L	G	N	G	W	Y	I	N	P	W	S	E	V	K	F	D	L	N	S	R	Y	K	L	N	T	D	I	N	Q	K	T	N	G	W	G	F	G	L	G	A	N	I	G	K	K	L
Template Known Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.													.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		196	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.									.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																	.	.	.	.	.	.	.	.
Query SS confidence				.	.																	.	.	.	.	.	.	.	.
Query Sequence		N	E	.	.	H	W	L	P	Y	F	E	L	R	W	L	D	R	N	V	E	.	.	.	.	.	.	.	.	P	Y	H	R	E	Q	N	Q	I	R	I	G	T	K	Y
Query Conservation				.	.																	.	.	.	.	.	.	.	.
Alig confidence				.	.																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	S	I	E	A	G	P	F	Y	K	Q	R	T	Y	K	E	S	G	E	F	S	V	S	L	T	I	P	K	T	S	I	R	E	Y	G	L	R	V	G	I	K	F
Template Known Secondary structure																						B				B
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions