Job Description P76773 Confidence 95.30% Date Thu Jan 5 12:25:21 GMT 2012 Rank 16 Aligned Residues 168 % Identity 12% Template d2fgqx1 SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.45

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		M	G	A	G	I	M	L	T	N	T	Y	N	F	Q	R	E	D	E	L	K	H	G	Y	N	E	I	E	G	W	Y	P	L	F	K	P	T	D	K	L	T	I	Q	P	G	G	L	I	N	D	K	S	I	G	S	G	.	.	.	.	G	A	V	Y	L	D	V	N	Y	K	F	V	P	W	F	N	L	T	V	R	N
Query Conservation																																																									.	.	.	.
Alig confidence																																				.																					.	.	.	.														.
Template Conservation																																				.																																						.
Template Sequence		G	G	F	N	A	G	F	G	Y	A	F	D	E	K	Q	T	I	G	T	A	D	S	V	G	R	Y	I	G	G	Y	V	A	Y	D	.	N	G	P	L	S	A	S	L	G	L	A	Q	Q	K	T	A	V	G	G	L	A	T	D	R	D	E	I	T	L	G	A	S	Y	N	F	G	V	.	A	K	L	S	G	L	L
Template Known Secondary structure		T	T											T	T			B	T	T	B	S	S	T	T											.		S	S															T	T																	S	S	.
Template Predicted Secondary structure																																				.																																						.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	N	H	N	N	Y	S	S	T	D	L	S	G	E	L	D	N	N	D	T	Y	E	I	G	T	Y	W	N	F	K	I	T	D	K	F	S	Y	T	F	E	P	H	Y	F	M	R	V	N	D	F	N	S	S	N	G	K	D	H	H	W	E	I	T	N	T	F	R	Y	R	I	N	E	H	W	L	P	Y	F	E
Query Conservation
Alig confidence								.	.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.																																							.	.	.	.	.	.
Template Sequence		Q	Q	T	K	F	K	.	.	.	.	.	.	R	D	I	G	G	D	I	K	T	N	S	Y	M	L	G	A	S	A	P	V	G	G	V	G	E	V	K	L	Q	Y	A	L	Y	D	Q	K	A	I	.	.	.	.	.	.	D	S	K	A	H	Q	I	T	L	G	Y	V	H	N	L	S	K	R	T	A	L	Y	G	N
Template Known Secondary structure								.	.	.	.	.	.		T	T	S																	T	T	T													G	G	G	.	.	.	.	.	.	T														S	S	S	S
Template Predicted Secondary structure								.	.	.	.	.	.																																							.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.							230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.							.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		205	.	.	.	.	210	.	.	.	.	.																.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	W	L	D	R	N	V	E	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	E	Q	N	Q	I	R	I	G	T	K	Y	F	F
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	F	L	K	N	K	D	A	S	T	L	G	L	Q	A	K	G	V	Y	A	G	G	V	Q	A	G	E	S	Q	T	G	V	Q	V	G	I	R	H	A	F
Template Known Secondary structure									T	T							B	T	T	T	B		S				T	T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions