Return to main results Retrieve Phyre Job Id

Job DescriptionP76773
Confidence89.89%DateThu Jan 5 12:25:21 GMT 2012
Rank20Aligned Residues178
% Identity11%Templated1phoa_
SCOP infoTransmembrane beta-barrels Porins Porin
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80.........90........ .100.........110......
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Query Sequence  FDMGAGIMLTNTYNFQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDK. . . . . . . . . . SIGSGGAVYLDVNYKFVP
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Template Sequence  VIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQNLQSRGTGKRAEAWATGLKYDANN
Template Known Secondary structure  T
TT

B
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STT
B
STTTT

GGGTTSSSS
SSTT
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   147..150.........160.........170.........180.........190.........200.........210.........220......
 
   117..120.........130.........140.........150.........160.........170.........180.........190......
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Query Sequence  WFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNGKDHHWEITNTFRYRIN
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Template Sequence  . IYLATFYSE. . . . TRKMTPITGGFANKTQNFEAVAQYQFDFGLRPSLGYVLSK. GKDIEGIGDEDLVNYIDVGATYYFN
Template Known Secondary structure  .....S
S

SSSS
S

SSS.SBTTTB

SS
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   225....230... ......240.........250.........260.........270... ......280.........290........
 
   197..200.........210... ......220.........230
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Query Sequence  EHWLPYFELRWLDRNVE. . PYHREQNQIRIGTKYFF
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Template Sequence  KNMSAFVDYKINQLDSDNKLNINNDDIVAVGMTYQF
Template Known Secondary structure  SS


SS
TT






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   305....310.........320.........330.........340
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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