Job Description P76773 Confidence 61.03% Date Thu Jan 5 12:25:21 GMT 2012 Rank 30 Aligned Residues 188 % Identity 11% Template c3rbhC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:alginate production protein alge; PDBTitle: structure of alginate export protein alge from pseudomonas aeruginosa Resolution 2.30 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.
Predicted Secondary structure																																.	.	.	.																																							.	.	.	.
Query SS confidence																																.	.	.	.																																							.	.	.	.
Query Sequence		A	S	D	Q	G	E	V	M	L	R	V	G	Y	N	F	D	M	G	A	G	I	M	L	T	N	T	Y	N	F	Q	.	.	.	.	R	E	D	E	L	K	H	G	Y	N	E	I	E	G	W	Y	P	L	F	K	P	T	D	K	L	T	I	Q	P	G	G	L	I	N	D	K	S	I	.	.	.	.	G	S	G	G
Query Conservation																																.	.	.	.																																							.	.	.	.
Alig confidence																																.	.	.	.																	.																						.	.	.	.
Template Conservation																																																				.
Template Sequence		W	L	G	I	E	A	T	G	D	A	Y	N	Y	R	S	S	X	P	L	N	Y	W	A	S	A	T	W	L	T	G	D	R	D	N	L	T	Q	S	G	D	V	N	A	F	G	V	D	L	G	L	.	R	W	N	I	D	E	Q	W	K	A	G	V	G	Y	A	R	G	S	G	G	G	K	D	G	E	E	Q	F	Q
Template Known Secondary structure										S	T	T		T	T		S		S																																	.					S	S	S														S	G	G	G	T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		A	V	Y	L	D	V	N	Y	K	F	V	P	W	F	N	L	T	V	R	N	R	Y	N	H	N	N	Y	S	S	T	D	L	S	G	E	L	D	N	N	D	T	Y	E	I	G	T	Y	W	N	F	K	I	T	D	K	F	S	Y	T	F	E	P	H	Y	F	M	R	V	N	D	F	N	S	S	N	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																					.					.	.	.	.	.	.	.	.																																												.	.	.	.	.
Template Conservation																					.					.	.	.	.	.	.	.	.
Template Sequence		Q	T	G	L	E	S	N	R	S	N	F	T	G	T	R	S	R	V	H	.	R	F	G	E	.	.	.	.	.	.	.	.	A	F	R	G	E	L	S	N	L	Q	A	A	T	L	F	G	S	W	Q	L	R	E	D	Y	D	A	S	L	V	Y	H	K	F	W	R	V	D	D	D	S	D	I	G	T	S	G	I	N
Template Known Secondary structure				S	B							T	T	S	S	S	S				.	T	T		T	.	.	.	.	.	.	.	.	T	T				S	S	S													T	T	T													S	S	T	T	S						S
Template Predicted Secondary structure																					.					.	.	.	.	.	.	.	.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.									.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
								180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.															.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure		.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Query SS confidence		.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Query Sequence		.	.	.	.	.	.	G	K	D	H	H	W	E	I	T	N	T	F	R	Y	R	I	N	E	H	W	L	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	L	R	W	L	D	R	N	V	E	P	Y	H	R	E	Q	.	.	.	N	Q	I	R	I	G	T	K	Y	F	F
Query Conservation		.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Alig confidence		.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation
Template Sequence		A	A	L	Q	P	G	E	K	D	I	G	Q	E	L	D	L	V	V	T	K	Y	F	K	Q	G	L	L	P	A	S	X	S	Q	Y	V	D	E	P	S	A	L	I	R	F	R	G	G	L	F	K	P	G	D	A	Y	G	P	G	T	D	S	T	X	H	R	A	F	V	D	F	I	W	R	F
Template Known Secondary structure						T	T																	S	S	S				T	T	S	G	G	G	G	T		S	S	S													T	T	S		T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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