Return to main results Retrieve Phyre Job Id

Job DescriptionP76773
Confidence4.00%DateThu Jan 5 12:25:21 GMT 2012
Rank81Aligned Residues37
% Identity19%Templatec3o9pA_
PDB info PDB header:peptide binding protein/peptideChain: A: PDB Molecule:periplasmic murein peptide-binding protein; PDBTitle: the structure of the escherichia coli murein tripeptide binding2 protein mppa
Resolution2.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   81........90....... ..100.........110.......
Predicted Secondary structure 



.







Query SS confidence 
















.



















Query Sequence  FKPTDKLTIQPGGLIND. KSIGSGGAVYLDVNYKFVPW
Query Conservation   
  
   
 

     .      


 

  
 

  
Alig confidence 
















.



















Template Conservation     
  
   
 

  
 
 
    

 

    



Template Sequence  VNQNEKGEIVPGVATQWKSNDNRIWTFTLRDNAKWADG
Template Known Secondary structure 
TTS
SS
SSSS
TT
B
TTS
Template Predicted Secondary structure 















Template SS confidence 





































   48.50.........60.........70.........80.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions