Job Description P76773 Confidence 39.63% Date Thu Jan 5 12:25:21 GMT 2012 Rank 37 Aligned Residues 144 % Identity 15% Template c3bryB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:tbux; PDBTitle: crystal structure of the ralstonia pickettii toluene2 transporter tbux Resolution 3.20 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																																														100	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	E	G	W	Y	P	L	F	K	P	T	D	K	L	T	I	Q	P	G	G	L	I	N	D	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	S	G	G	A	V	Y
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		R	V	P	F	S	A	A	.	Y	H	V	T	D	K	L	T	V	G	A	S	V	D	A	V	W	T	S	L	N	L	G	T	L	L	D	V	S	Q	I	G	T	L	A	G	Q	G	R	V	S	G	T	L	V	P	T	L	L	G	V	P	G	L	S	G	G	Y	I	D	F	S	G	V	Q	A	W	G	I	G	G	R
Template Known Secondary structure									.			S	S	S	S																						S		S	S	S	S	T	T	T	S	S	S				T	T	T	T	T	T	T	S	S	S			S
Template Predicted Secondary structure									.
Template SS confidence
		137	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	V	N	Y	K	F	V	P	W	F	N	L	T	V	R	N	R	Y	N	H	N	N	Y	S	S	T	D	L	S	G	E	L	D	N	N	D	T	Y	E	I	G	T	Y	W	N	F	K	I	T	D	K	F	S	Y	T	F	E	P	H	Y	F	M	R	V	N	D	F	N	S	S	N	G	K	D	H	H	W	E	I
Query Conservation
Alig confidence																																																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	L	T	Y	Q	V	T	P	D	T	R	I	G	A	A	Y	Q	A	K	T	H	V	G	D	L	T	G	Q	A	T	L	S	A	V	G	N	I	P	L	K	G	D	V	T	V	R	N	F	Q	M	P	A	Q	L	T	V	G	I	S	H	Q	F	N	D	Q	.	.	.	.	.	.	.	.	.	.	.	L	S	V
Template Known Secondary structure										T	T											B	B											B																		B												S	S	S	S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.												.	290	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.									.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.
Query Sequence		T	N	T	F	R	Y	R	I	N	E	H	W	L	P	Y	F	E	L	R	W	L	D	R	N	V	E	P	.	.	.	.	.	.	.	.	Y	H	R	E	Q	N	Q	I	R	I	G	T	K	Y
Query Conservation																													.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	D	Y	Q	R	V	F	W	S	S	V	M	K	D	M	N	V	G	F	V	Q	S	G	S	A	A	N	L	D	L	S	L	P	Q	N	Y	R	D	I	S	V	F	G	I	G	A	E	Y
Template Known Secondary structure										G	G	G			S									S	S	S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions