Job Description P76773 Confidence 6.21% Date Thu Jan 5 12:25:21 GMT 2012 Rank 62 Aligned Residues 153 % Identity 8% Template c2y0lA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:cis-aconitate porin opdh; PDBTitle: crystal structure of pseudomonas aeruginosa opdo Resolution 2.59 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100									.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130															.
Predicted Secondary structure																													.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	E	G	W	Y	P	L	F	K	P	T	D	K	L	T	I	Q	P	G	G	L	I	N	D	K	S	I	.	.	.	.	.	.	.	.	G	S	G	G	A	V	Y	L	D	V	N	Y	K	F	V	P	W	F	N	L	T	V	R	N	R	Y	N	H	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y
Query Conservation																													.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.						.															.	.	.	.	.	.	.	.															.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.						.																																					.
Template Sequence		V	G	L	L	H	S	.	W	P	I	G	P	.	G	E	L	T	S	D	L	R	F	A	R	S	T	D	S	G	S	A	K	A	G	G	I	D	N	K	S	L	N	G	M	F	T	Y	S	L	.	G	N	H	A	F	G	A	A	W	Q	R	M	N	G	D	D	A	F	P	Y	L	E	G	S	N	P	Y	L	V	N
Template Known Secondary structure								.				S	S	.	S															T	T		T	T																	.	T	T												S	S	S					B	T	T						T	T
Template Predicted Secondary structure								.						.																																					.
Template SS confidence
		222	.	.	.	.	.		.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		S	S	T	D	L	S	G	E	L	D	N	N	D	T	Y	E	I	G	T	Y	W	N	F	K	I	T	D	K	F	S	Y	T	F	E	P	H	Y	F	M	R	V	N	D	F	N	S	S	N	G	K	D	H	H	W	E	I	T	N	T	F	R	Y	R	I	N	.	.	.	.	E	H	W	L	P	Y	F	E	L	R	W
Query Conservation																																																																			.	.	.	.
Alig confidence																																																																			.	.	.	.
Template Conservation
Template Sequence		F	V	Q	V	N	D	F	A	G	P	K	E	R	S	W	Q	L	R	Y	D	Y	D	F	V	G	L	G	I	P	G	L	T	F	M	T	R	Y	V	K	G	D	N	V	E	L	A	G	Q	G	E	G	R	E	W	E	R	N	T	E	L	Q	Y	V	F	Q	S	G	A	L	K	N	L	G	I	R	W	R	N	A	T
Template Known Secondary structure				S	S					S	T	T												G	G	G	G	T		T	T																S																				S	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	R	N	V	E	P	Y	H	R	E	Q	N	Q	I	R	I	G	T	K	Y	F	F
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		F	R	S	N	F	T	R	D	I	D	.	E	N	R	L	I	V	S	Y	T	L	P	I
Template Known Secondary structure					S	S	S					.
Template Predicted Secondary structure												.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.	.	.	400	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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