Job Description P76773 Confidence 65.69% Date Thu Jan 5 12:25:21 GMT 2012 Rank 29 Aligned Residues 154 % Identity 8% Template c2y0kA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:pyroglutatmate porin opdo; PDBTitle: crystal structure of pseudomonas aeruginosa opdo Resolution 2.30 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130															.	.	.	.	.
Predicted Secondary structure																																.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	E	G	W	Y	P	L	F	K	P	T	D	K	L	T	I	Q	P	G	G	L	I	N	D	K	S	I	G	S	G	.	.	.	.	G	A	V	Y	L	D	V	N	Y	K	F	V	P	W	F	N	L	T	V	R	N	R	Y	N	H	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	S	T	D
Query Conservation																																.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																								.	.	.	.												.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																																							.
Template Sequence		A	G	L	V	H	T	.	L	D	L	G	R	S	L	K	S	D	L	R	F	A	R	A	S	E	D	G	G	F	R	E	L	D	N	R	A	F	G	A	L	F	S	L	R	L	.	G	A	H	A	V	A	A	G	Y	Q	R	I	S	G	D	D	P	Y	P	Y	I	A	G	S	D	P	Y	L	V	N	F	I	Q	I
Template Known Secondary structure								.																				T	T	S																	.	T	T												S	S	S					B	T	T	S					T	T			S	S
Template Predicted Secondary structure								.																																							.
Template SS confidence
		206	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		L	S	G	E	L	D	N	N	D	T	Y	E	I	G	T	Y	W	N	F	K	I	T	D	K	F	S	Y	T	F	E	P	H	Y	F	M	R	V	N	D	F	N	S	S	N	G	K	D	H	H	W	E	I	T	N	T	F	R	Y	R	I	N	.	.	.	.	E	H	W	L	P	Y	F	E	L	R	W	L	D	R	N
Query Conservation																																																															.	.	.	.
Alig confidence																																																															.	.	.	.
Template Conservation
Template Sequence		G	D	F	G	N	V	D	E	R	S	W	Q	L	R	Y	D	Y	D	F	G	A	L	G	L	P	G	L	S	F	M	S	R	Y	V	S	G	D	N	V	A	R	G	A	A	N	D	G	K	E	W	E	R	N	T	D	L	G	Y	V	V	Q	S	G	P	L	K	N	L	G	V	K	W	R	N	A	T	V	R	S	N
Template Known Secondary structure						S	T	T													T	T	T	T		T	T																T	T																			S	S	T	T	T	T													S
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	P	Y	H	R	E	Q	N	Q	I	R	I	G	T	K	Y	F	F
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		F	A	N	D	L	D	.	E	N	R	L	I	L	S	Y	S	L	A	L
Template Known Secondary structure		S	S					.
Template Predicted Secondary structure								.
Template SS confidence
		366	.	.	.	370	.		.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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