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Job DescriptionP76773
Confidence12.43%DateThu Jan 5 12:25:21 GMT 2012
Rank48Aligned Residues183
% Identity11%Templatec2k4tA_
PDB info PDB header:membrane protein,apoptosisChain: A: PDB Molecule:voltage-dependent anion-selective channel PDBTitle: solution structure of human vdac-1 in ldao micelles
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EVMLRVGYNFDMGAGIMLTNTYNFQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFV. .
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Template Sequence  GTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREH. . INLGCDMDFDIAGP. SIRGALVLGYEGWLAGYQMNFE
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Query Sequence  . . . . . . PWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNGKDHHWEITN
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Template Sequence  TAKSRVTQSNFAVGYKTDEFQLHTNVND. . . . . . . GTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKYQIDPDA
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   159160.........170.........180...... ...190.........200.........210.........220.........230.
 
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Query Sequence  TFRYRINEHWLPYFELR. . . . . . . . . WLDRNVEPYHREQNQIRIGTKYFF
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Template Sequence  CFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEF
Template Known Secondary structure  SSS

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   232.......240.........250.........260.........270.........280.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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