Job Description P76773 Confidence 98.26% Date Thu Jan 5 12:25:21 GMT 2012 Rank 2 Aligned Residues 175 % Identity 16% Template c2iwvD_ PDB info PDB header:ion channel Chain: D: PDB Molecule:outer membrane protein g; PDBTitle: structure of the monomeric outer membrane porin ompg in the2 open and closed conformation Resolution 2.3 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.							.
Predicted Secondary structure																						.																											.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																						.																											.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		A	G	I	M	L	T	N	T	Y	N	F	Q	R	E	D	E	L	K	H	G	.	Y	N	E	I	E	G	W	Y	P	L	F	K	P	T	D	K	L	T	I	Q	P	G	G	L	I	N	.	.	.	.	.	D	K	S	I	G	S	G	G	A	V	Y	L	D	V	N	Y	K	F	V	P	W	.	.	.	.	.	.	F
Query Conservation																						.																											.	.	.	.	.																						.	.	.	.	.	.
Alig confidence																						.															.	.											.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																																					.	.
Template Sequence		I	G	A	M	Y	E	I	E	N	V	E	G	Y	G	E	D	M	D	G	L	A	E	P	S	V	Y	F	N	A	A	N	G	P	W	R	.	.	I	A	L	A	Y	Y	Q	E	G	P	V	D	Y	S	A	G	K	R	G	T	W	F	D	R	P	E	L	E	V	H	Y	Q	F	L	E	N	D	D	F	S	F	G	L
Template Known Secondary structure												S	S	S	B	T	T	B	T														T	T			.	.													T	T	T	T				S																	S	S
Template Predicted Secondary structure																																					.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	T	V	R	N	R	Y	N	H	N	N	Y	S	S	T	D	L	S	G	E	L	D	N	N	D	T	Y	E	I	G	T	Y	W	N	F	K	I	T	D	K	F	S	Y	T	F	E	P	H	Y	F	M	R	V	N	D	F	N	S	S	N	G	K	D	H	H	W	E	I	T	N	T	F	R	Y	R	I	N	E	H
Query Conservation
Alig confidence																					.	.	.
Template Conservation																					.	.	.
Template Sequence		T	G	G	F	R	N	Y	G	Y	H	Y	V	D	E	P	G	K	D	T	.	.	.	A	N	M	Q	R	W	K	I	A	P	D	W	D	V	K	L	T	D	D	L	R	F	N	G	W	L	S	M	Y	K	F	A	N	D	L	N	T	T	G	Y	A	D	T	R	V	E	T	E	T	G	L	Q	Y	T	F	N	E	T
Template Known Secondary structure													S	S		T	T				.	.	.																	S	S	S														S									S														S	S	S
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		199	200	.	.	.	.	.						.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		W	L	P	Y	F	E	L	.	.	.	.	.	R	W	L	D	R	N	V	E	P	Y	H	R	E	Q	N	Q	I	R	I	G	T	K	Y	F	F
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.
Template Conservation
Template Sequence		V	A	L	R	V	N	Y	Y	L	E	R	G	F	N	M	D	D	S	R	N	N	G	E	F	S	T	Q	E	I	R	A	Y	L	P	L	T	L
Template Known Secondary structure		B														S	S	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions