 |
Job Description | P76773 | Confidence | 4.29% | Date | Thu Jan 5 12:25:21 GMT 2012 |
Rank | 77 | Aligned Residues | 44 |
% Identity | 11% | Template | c2djmA_ |
PDB info |
PDB header:sugar binding protein | Chain: A: PDB Molecule:glucoamylase a; |
PDBTitle: solution structure of n-terminal starch-binding domain of2 glucoamylase from rhizopus oryzae
|
Resolution | UNK |
|
  |   |
181 | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
. | . | . | 200 | . | . | . | . | . | |
|
. | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | D | H | H | W | E | I | T | N | T | F | R | Y | R | I | N | . |
E | H | W | L | P | Y | F | E | L | . |
. |
R | W | L | D | R | N | V | E | P | Y | H | R | E | Q | N | Q | I | R | I |
Query Conservation |   |
|   |   |   |   |
|   |   |
|
|   |   |
|
|   |   | . |   |   |
|   |
|
|
|
|   | . | . |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|   |
|   |
|
|
|
|   |
|   |
|   |
|   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
Template Sequence |   |
K | N | I | A | Y | S | K | K | V | T | V | V | Y | A | D | G | S | D | N | W | N | N | N | G | N | I | I | A | A | S | F | S | G | P | I | S | G | S | N | Y | E | Y | W | T | F | S | A |
Template Known Secondary structure |   |
|
| S | S | S |
|  |  |  |  |  |  |  |  |  | T | T | S | S |
| S | S |
|
|
|  |  |  |
|  |  |  |  |  |
| T | T | S | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|