 |
Job Description | P0A8M3 | Confidence | 94.81% | Date | Thu Jan 5 11:08:11 GMT 2012 |
Rank | 119 | Aligned Residues | 76 |
% Identity | 25% | Template | d3c8ya2 |
SCOP info | beta-Grasp (ubiquitin-like)
| 2Fe-2S ferredoxin-like
| 2Fe-2S ferredoxin domains from multidomain proteins
|
Resolution | 1.39 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |
|
| . | . |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | P | V | I | T | L | P | D | G | S | Q | R | H | Y | D | H | A | V | S | P | M | D | V | A | L | D | I | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | G | L | A | K | A | C | I | A | G | R | V | N | G | . |
. |
E | L | V | D | A | C | D | L | I | E | N | D | A | Q | L | S | I | I | T | A | K | D |
Query Conservation |   |
|   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |
|   |
|
|
| . | . |   |
|   |
|
|   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
Template Conservation |   |
|
|   |
|
|
| . |
|
|   |   |
|   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |
|
|   |
|
|   |
|
|   |   |   |   |
|   |   |   |   |
|   |
|   |   |
|   |
|
|
|   |
|   |   |   |
|   |
|
|   |
|   |
|   |   |
|
|   |
| . | . | . |   |
|   |
|
Template Sequence |   |
M | K | T | I | I | I | . |
N | G | V | Q | F | N | T | D | E | D | T | T | I | L | K | F | A | R | D | N | N | I | D | I | S | A | L | C | F | L | N | N | C | N | N | D | I | N | K | C | E | I | C | T | V | E | V | E | G | T | G | L | V | T | A | C | D | T | L | I | E | D | G | M | I | I | . |
. |
. |
N | T | N | S |
Template Known Secondary structure |   |
|  |  |  |  |  | . | T | T |  |  |  |  |  |
|
|
|
| B |  |  |  |  |  |  |  | T | T |
|
|
|
|
| S | S |
| B | T | T | B |
|
| S | S | S |
|
|
| T | T |  |  |  |  | T | T | T |  |  |  |  | G | G | G |
| B |
|
| T | T |
|  |  | . | . | . |  | S | S |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  | . |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  | . | . | . |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | |
. | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
. | . | . | . |
  |
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | E | G | L | E | I | I | R | H | S | C | A | H | L | L | G |
Query Conservation |   |
  |   |
|   |   |   |   |   |
|
|   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |
Template Sequence |   |
D | A | V | N | E | K | I | K | S | R | I | S | Q | L | L | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|